Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0145 ATGTCAATGTTCTCTTCTCTCGTTCTCCTTCTCCTTCCTCTTCTTCTACTCACATCCTTTACTATCCCATCGTCTTCCTCCTCCAGCGAGGCTTTCATCTTTGGCGGTTGCTCTCAGGCTAAGTTTACGCCGGGCTCTGCCTACGAGTCCGGCGTCAACTCCGCACTCACTACAATCGTCAACGCCGCCATGTTCTCCTCCTACAACAACCTCACCGTCCCTCCCTCCTCCTCCTCACAGGACACCCCTATCTATGGCCTCTTCCAGTGCCGCGGCGACCTTGCCGCCACCGACTGCTCCCGCTGTGTTGCGCAGGCCGTCTCCCAGCTTGGCACCATCTGCCCTGACTCCACCGGCGGCGCCTTGCAGCTCGACGGTTGTTTCGTTAAGTATGATGATTCTAAGTTCTTGGGCGTGGAGGACAAAACTTTGGTCCTGAAGAAATGTGGGCCGTCCATTGGGTTTACTTCCGACGTGTTGACTCGGCGAGATGCCGTGCTGGCGTATTTGGAGACGTCCGATGGGATATACAACACCTTTAGAACGACCAGCTCGGGGGACTTGCAGGGTATGGCGCAGTGCGTAGGGGATTTGAGTGCGACGGAGTGCCAGGATTGTCTCTCGAATGCGATCGGACGGCTCAGAGTAGAGTGTGGGCCCGCCCAGTGGGGACAGATATACTTGGCCAAGTGCTACGCGCGCTACTCCCAAGGTGGAGATTACTCGCCCGGCGTAAACGGTGAGCATGAAAACAAGAAGAACGACGATGAACTTCAGAAGACACTGGCAATAATAGTTGGACTCATAGCAGGGGTGGCTCTACTCATCATCTTCATTTCATTCTTGACCAAGTTGTGTAAAAAGGATAAAGGTGGCAAATGA 882 0.5431 MSMFSSLVLLLLPLLLLTSFTIPSSSSSSEAFIFGGCSQAKFTPGSAYESGVNSALTTIVNAAMFSSYNNLTVPPSSSSQDTPIYGLFQCRGDLAATDCSRCVAQAVSQLGTICPDSTGGALQLDGCFVKYDDSKFLGVEDKTLVLKKCGPSIGFTSDVLTRRDAVLAYLETSDGIYNTFRTTSSGDLQGMAQCVGDLSATECQDCLSNAIGRLRVECGPAQWGQIYLAKCYARYSQGGDYSPGVNGEHENKKNDDELQKTLAIIVGLIAGVALLIIFISFLTKLCKKDKGGK 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0145 293 Pfam Salt stress response/antifungal 179 237 IPR002902 -
Lele56g0145 293 Pfam Salt stress response/antifungal 37 133 IPR002902 -
Lele56g0145 293 Gene3D - 155 238 IPR038408 -
Lele56g0145 293 Gene3D - 29 136 IPR038408 -
Lele56g0145 293 ProSiteProfiles Gnk2-homologous domain profile. 137 240 IPR002902 -
Lele56g0145 293 FunFam cysteine-rich repeat secretory protein 3 29 136 - -
Lele56g0145 293 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 3 286 - -
Lele56g0145 293 FunFam Cysteine-rich repeat secretory protein 60 157 238 - -
Lele56g0145 293 ProSiteProfiles Gnk2-homologous domain profile. 30 136 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0145 Lele-ChrLele56 1346164 1348115 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g0145 2 235 Pollen Coat Proteome AT4G20670 25.681 9.51e-16 73.9