Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele56g0130 | ATGGCGATGGCGAGGGAGATAGAGGAGGAAGGAGACGTACAGAACAACGCAGGCAAGAGGCTGAAATGCATGAAGAATGAGAAGGTTCAACCAGAGGAGGAAGCTGCGGAAGATGAAAGTGAGCTTCCTCTCCAGCCCGGCCTCTTCTTCTATCCAACTACTCCTACGTCTTTCGTTGTCTCCGATGCTCTTGAACCGGATTTTCCCATCATCTATGTCAACAAGGTCTTTGAACTCGTCACCGGCTATCGCGCCGATGAGGTTTTGGGTCGGAACTGTCGGTTCTTACAGTATAGGGACCCTCATGCTCAAAGGAGGCACCCTTTGGTGGATCCTGTTGTTGTGTCTGAGATTAGAAGATGTCTTGAGGAAGGTATTGAGTTCCAAGGTGAACTTCTGAATTTCAGGAAGGATGGCATTCCTTTAGTGAACAGGCTGAAACTTGCTCCAATTCATGATGATAATGGGACTATGACACATGTAATAGGCATCCAGCTATTTTCTGAAGCAAATATAGATCTAAATCGTGTCTCATATCCGGTGTTCAAGGAGACCTGCAATCAGGAAATTGACAAGACTGGTAAAAATTCTATTAAGAGTGGACGACCATTATACAGCCAGCACCAAGAGATGTGTGGCATTCTTCAGCTTTCTGATGAGGTCTTGGCTCATAACATCTTGTCACGCCTGACACCAAGGGATGTTGCATCGATTGGGTCTGTGTGCAGAAGGATCCGTCAATTAACACAGAATGAGCATGTTAGAAAGATGGTGTGTCAAAATGCGTGGGGAAAAGAAGTGACCGGTGCACTGGAACTGATGACCAAGAAGTTAGGATGGGGTCGTCTTAGCCGAGAACTAACCACTCTTGAGGCTGTTCGTTGGAGAAAACTGACAGTAGGAGGTGCAGTAGAGCCTTCACGCTGCAATTTCAGTGCTTGTGCTGCAGGAAATCGCCTTGTATTGTTCGGGGGTGAAGGAGTTGATATGCAGCCTATGGATGACACTTTTGTCCTCAATCTTGATGCTAAAAATCCTGAGTGGCGTAGGATTAGTGTGAAATCATCCCCACCAGGAAGGTGGGGCCACACACTCTCCTGCTTAAATGGTTCTTGGTTGGTGGTATTTGGAGGATGTGGTAGGGAAGGATTGCTTAATGACGTGTTTGTTCTTGATTTGGATGCTCAACAGCCAACGTGGAAAGAAGTCTGTGGTGGAACTCCGCCTCTCCCTAGATCTTGGCACAGCTCTTGCACTGTTGAAGGGTCTAAATTGGTAGTCTCAGGTGGGTGCACAGATGCTGGGGTACTTCTTAGTGATACATACCTACTGGACCTTACTACGGAGAATCCAACATGGAGGGAAATTCCAACTTCTTGGGCTCCTCCTTCTCGATTGGGGCACTCACTCTCTGTATATGGAAGGACAAAAATTCTTATGTTTGGTGGACTTGCCAAGAGCGGACACTTGCGATTACGATCAGGGGAGGCTTATACAATTGACTTGGAAGATGAAGAGGCTCAGTGGAGGCAGCTAGAATATAGCGCATTCTCTGGAATGGGTGGTCAAAGTGCTGTTGTTCCTCTACCTCGGCTGGATCATGTCGCAGTGAGCATGCCTTGTGGGAGGATCATTATTTTTGGAGGCTCCATTACAGGGCTTCACTCTCCATCCCAGCTCTTTCTTTTGGACCCATCTGAGGAGAAACCATCATGGAGGATCCTCAATGTGCCGGGGCAACCCCCAAAATTTGCTTGGGGTCATAGCACTTGTGTGGTTGGAGGGACTAGGGTTTTGGTTTTGGGTGGACGTACAGGGGAGGAGTGGATACTTAATGAGTTGCATGAGTTATGCTTAGCAAGCAAGCAGGACTCCGACCTAAGGTGA | 1887 | 0.4769 | MAMAREIEEEGDVQNNAGKRLKCMKNEKVQPEEEAAEDESELPLQPGLFFYPTTPTSFVVSDALEPDFPIIYVNKVFELVTGYRADEVLGRNCRFLQYRDPHAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFRKDGIPLVNRLKLAPIHDDNGTMTHVIGIQLFSEANIDLNRVSYPVFKETCNQEIDKTGKNSIKSGRPLYSQHQEMCGILQLSDEVLAHNILSRLTPRDVASIGSVCRRIRQLTQNEHVRKMVCQNAWGKEVTGALELMTKKLGWGRLSRELTTLEAVRWRKLTVGGAVEPSRCNFSACAAGNRLVLFGGEGVDMQPMDDTFVLNLDAKNPEWRRISVKSSPPGRWGHTLSCLNGSWLVVFGGCGREGLLNDVFVLDLDAQQPTWKEVCGGTPPLPRSWHSSCTVEGSKLVVSGGCTDAGVLLSDTYLLDLTTENPTWREIPTSWAPPSRLGHSLSVYGRTKILMFGGLAKSGHLRLRSGEAYTIDLEDEEAQWRQLEYSAFSGMGGQSAVVPLPRLDHVAVSMPCGRIIIFGGSITGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGRTGEEWILNELHELCLASKQDSDLR | 628 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele56g0130 | 628 | Gene3D | PAS domain | 51 | 176 | - | - | |
Lele56g0130 | 628 | Pfam | Galactose oxidase, central domain | 373 | 419 | - | - | |
Lele56g0130 | 628 | Pfam | Galactose oxidase, central domain | 422 | 473 | - | - | |
Lele56g0130 | 628 | Pfam | F-box domain | 214 | 251 | IPR001810 | GO:0005515 | |
Lele56g0130 | 628 | FunFam | Putative LOV domain-containing protein | 491 | 623 | - | - | |
Lele56g0130 | 628 | SUPERFAMILY | Galactose oxidase, central domain | 294 | 612 | IPR011043 | - | |
Lele56g0130 | 628 | TIGRFAM | sensory_box: PAS domain S-box protein | 69 | 164 | IPR000014 | - | |
Lele56g0130 | 628 | MobiDBLite | consensus disorder prediction | 1 | 32 | - | - | |
Lele56g0130 | 628 | Gene3D | - | 286 | 490 | IPR015915 | GO:0005515 | |
Lele56g0130 | 628 | Pfam | PAS domain | 64 | 164 | IPR000014 | - | |
Lele56g0130 | 628 | Gene3D | - | 491 | 623 | IPR015915 | GO:0005515 | |
Lele56g0130 | 628 | FunFam | Adagio protein 1 | 47 | 176 | - | - | |
Lele56g0130 | 628 | PANTHER | BACTERIOOPSIN TRANSCRIPTIONAL ACTIVATOR | 39 | 621 | - | - | |
Lele56g0130 | 628 | Pfam | Galactose oxidase, central domain | 308 | 358 | - | - | |
Lele56g0130 | 628 | SUPERFAMILY | PYP-like sensor domain (PAS domain) | 65 | 165 | IPR035965 | - | |
Lele56g0130 | 628 | CDD | PAS | 54 | 164 | IPR000014 | - | |
Lele56g0130 | 628 | SUPERFAMILY | F-box domain | 206 | 266 | IPR036047 | GO:0005515 | |
Lele56g0130 | 628 | Pfam | Kelch motif | 532 | 579 | IPR011498 | GO:0005515 | |
Lele56g0130 | 628 | MobiDBLite | consensus disorder prediction | 1 | 41 | - | - | |
Lele56g0130 | 628 | Gene3D | - | 207 | 258 | - | - | |
Lele56g0130 | 628 | ProSiteProfiles | PAS repeat profile. | 70 | 101 | IPR000014 | - | |
Lele56g0130 | 628 | FunFam | Putative LOV domain-containing protein | 285 | 490 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele56g0130 | Lele-ChrLele56 | 1256075 | 1259790 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele56g0130 | 57 | 178 | AGC Kinase Gene Family | AT5G58140 | 35.484 | 1.44e-15 | 78.6 |