Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0115 ATGGCTCCGGAATGGATAACCACGGATCCAATCACCTCGAAAGCCGACGTGTACAGCTTTGGGATGGTGTTGCTGGAGCTGGTGAGTGGGGTCAGGAACTTTGAGATTCAAGGATCATTGTTGAACAGTGAAGAGTGGTATTTCCCTGGGTGGGCTTTTGATAAGATGTTCAAGGAGATGAGGCCCGAAGACATTCTGGACCGTGAGATTAAGCAGTTTTACGACAGTAGGGCCCATTTTGATATGATTAATAGGATGGTGAAGACGGCAATGTGGTGCCTTCAAGATAGGCCCGAGATGAGGCCCACCATGGGAAAAGTGTCTAAGATGTTGGAAGGCACAGTGGAGATTATTGAGCCCAATAAGCCCACTGTCTTCTTCCCTGGAGATGAATAG 396 0.4823 MAPEWITTDPITSKADVYSFGMVLLELVSGVRNFEIQGSLLNSEEWYFPGWAFDKMFKEMRPEDILDREIKQFYDSRAHFDMINRMVKTAMWCLQDRPEMRPTMGKVSKMLEGTVEIIEPNKPTVFFPGDE 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0115 131 Pfam Protein tyrosine and serine/threonine kinase 1 110 IPR001245 GO:0004672|GO:0006468
Lele56g0115 131 SUPERFAMILY Protein kinase-like (PK-like) 1 123 IPR011009 -
Lele56g0115 131 PANTHER OS07G0415500 PROTEIN 1 126 - -
Lele56g0115 131 ProSiteProfiles Protein kinase domain profile. 1 115 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele56g0115 131 Gene3D Transferase(Phosphotransferase) domain 1 1 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0115 Lele-ChrLele56 1153239 1153634 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g0115 1 123 Receptor kinase-like Gene Family AT4G18250 31.496 1.28e-17 75.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lele56g0115 PK_Tyr_Ser-Thr 1.1e-09 CL0016