Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele56g0112 | ATGCAGAGCCAGCCCCAGCACCACCCTGTGGCTTTGAGGTTCCATGAGCAAACGGGGAGTAAAAGAAAATACACTTTCATTCAGGCTAAAAGAGCTTGGCTCCCAAAGTTTCTGCTGCTGTGGATCATGATGATGATGCTATTCAGTGGGTCCATCTACAATGCTATGGATGCTGATAATAAAGTTAGGAGGAGAGAGGTTCTGGGTAGCCTCTGTGAGCAACGGGCCAGGATGTTGCAAGATCAATTTAGTGTTAGTGTTAACCATGTCCATGCCCTAGCTATTCTGGTTTCAACCTTCCACTACTACAGAAACCCATCTGCAATTGATCAGGAAACCTTTGCGGAGTATACGGTCAGAACAGCATTTGAGCGGCCATTACTGAATGGGGTGGCTTATGCACAAAGGGTAGTTGACTCCGGAAGAGAAAACTTTGAGAGCCAACACGGATGGGTGATAAAGACTATGGAGAGGGAGCCTTCCCCCATTCGAGATGAGTATGCCCCAGTGATATTTGCCCAAGAAACCATCTCTTATCTTAAGTCTCTTGATATGATGTCAGGGGAGGAGGACCGAGAGAACATTCTGAGGGCTAGGGCCACTGGGAAAGCTGTACTGACTAGCCCATTCAAGCTGTTGGGTTCTCATCATCTTGGTGTGGTTTTGACATTCCCTGTTTACAAATCCAAGCTCTCCCCAGAGCCGACTATGAAAGAGCGCATAGAGGCAACTGCAGGATATGTTGGAGGGTCCTTTGATGTCGAGTCCCTTGTGGAGAATTTACTTGGGCAGCTTGCTGGTAACCAAGCAATTTTGGTGCATGTGTATGATATCACAAACTCTACTTACCCGCTAATCATGTATGGCAACCAATATGAAGGTGACAAGTCTCTTGTACATAAGAGCAAGCTTGACTTTGGAGATCCTTACAGGAAACATCAGATGATATTGGGATACATTTTATATGGTGCTGCAATTCATATTGTCAAAGTTGAGGATGATTTCCATGAGATGCAGGAACTAAAAGTTCGAGCTGAAGCTGCTGATGTTGCCAAATCCCAGTTTTTAGCAACTGTTTCTCATGAAATTAGAACACCAATGAATGGCATCTTAGGAATGCTTGGTCTGCTTCTTGATACGGAATTGAGTTCAACTCAACGAGATTATGCTCAGACTGCTCAAGCATGTGGAAAAGCACTGATAGCATTAATAAATGAGGTGCTTGACCGAGCTAAAATTGAAGCTGGCAAGTTAGAGCTAGAAGCAGTTCCATTTGACCTGCGTTCCATACTTGATGATGTCCTTTCTTTATTCTCTGAGAAGTCTAGACACAAAGGTTTAGAGTTTACTTACATAGTTCTTTCTTTGTTTCATCTTTCTGGGTCTGATGTCACTGGATGCTGTTGAGATCCAGGGAGATTCAGACAAATAATAACCAATCTAGTTGGCAACTCTGTCAAATTCACTGAACGGGGGCACATAGTTGTTAAGGTTCATCTAGCTGAAAATATAAATGCTACAATGAATGGAAAATCTGAGACATATCTAAATGGAGGGTCGGATGATGTTGTGCATATGGCTGGCGGTTATCAGTCCAAAACTCTCAGTGGATGCGAAGCAGCTGATGAAAGGAACTGTTGGGATAATTTTAAGCATCTAATTGCTGATGAAGAATTTTGCTTTGATGCATCAAGTAAAAAGATGACCACCATTCAAGTTTCTGAGCAAGTCACTCTGATGGTCTGTGTAGAGGATACTGGTATTGGGATTCCCTTTTCTGCCCAGGATAGGATTTTCATGCCTTTTGTGCAGGCGGACAGCTCAACCTCTCGAAACTATGGTGGGACCGGTATTGGATTAAGCATCAGTAAGTGTTTGGTTGAATTAATGGGTGGTCAAATTAACTTCATAAGCCGACCCCAGGTTGGGAGCACATTTTCCTTCACTGCAGTTTTTGGTACATATAAGAAAAACGCAATCAGTGACGTGAAGAAACATAATGTGGAAGATCTACCCTCTAGTTTTAGAGGACAGAAAGCCATAGTGGTCGATGGAAAACCTGTTAGAGCTGCTGTGACTCGATACCATCTGAAGAGGCTTGGGATAATAGCTAAAGTTGCTAATGACATTAAAAAGGCTGTTGCTTTATGCGGGAAAAACGTTAATCTAACTGAATATGGCAGAATGTTCCAGCCAGATATAATTTTGGTTGAGAAGGACTCGTGGATATCTGGAGAAGATGGAAGCTTCAATGTTTGGCAACTAGACTGGAAACAGAACGGACATACAATTAAGTTGCCCAAATTGATCCTTCTCGCGACCAATATTAGTAATGCCGAGTTTGATAAAGCTAAAGCTGCTGGTTTTGCTGATACTGTGATCATGAAACCTCTGAGAGCTAGTATGATAGGTGCTTGTCTTCAGCAGGTTCTTGGTGTGGGGAAGAAAAGACAGCAAGGAAAAGACATGGTTAACGGTTCCACTTTTCTTCGAGGCCTTCTTTGTGGAAAGAAAATTTTGGTGGTCGATGACAATGTGGTGAACCGGAGGGTTGCCGCAGGTGCATTGAAGAAGTTTGGAGCTGACGTGAAGTGCGTCGAAAGTGGCAAAGCGGCACTTGAAATGCTTCAATTGCCTCATAGTTTTGATGCGTGCTTCATGGACATCCAAATGCCAGAGATGGATGGGTTTGAAGCAACACGGCAAATCCGGCAGATGGAAAGTGTGGCAAATGAGCAGGCAAATGGGGGATCTAATGGAGGAAATGCCTATAAAAGTGAGTGGCATTTGCCAGTATTAGCCATGACAGCTGATGTAATTCATGCGACCTATGACGAGTGCCTGAAATGCGGTATGGATGGATACGTGTCGAAGCCGTTCGAGGAAGAGAATCTGTATAAAGAAGTCGCAAAGTTCTTCAAATCCAAGTCTATCTCAGACTCATGA | 2946 | 0.4355 | MQSQPQHHPVALRFHEQTGSKRKYTFIQAKRAWLPKFLLLWIMMMMLFSGSIYNAMDADNKVRRREVLGSLCEQRARMLQDQFSVSVNHVHALAILVSTFHYYRNPSAIDQETFAEYTVRTAFERPLLNGVAYAQRVVDSGRENFESQHGWVIKTMEREPSPIRDEYAPVIFAQETISYLKSLDMMSGEEDRENILRARATGKAVLTSPFKLLGSHHLGVVLTFPVYKSKLSPEPTMKERIEATAGYVGGSFDVESLVENLLGQLAGNQAILVHVYDITNSTYPLIMYGNQYEGDKSLVHKSKLDFGDPYRKHQMILGYILYGAAIHIVKVEDDFHEMQELKVRAEAADVAKSQFLATVSHEIRTPMNGILGMLGLLLDTELSSTQRDYAQTAQACGKALIALINEVLDRAKIEAGKLELEAVPFDLRSILDDVLSLFSEKSRHKGLEFTYIVLSLFHLSGSDVTGCCXDPGRFRQIITNLVGNSVKFTERGHIVVKVHLAENINATMNGKSETYLNGGSDDVVHMAGGYQSKTLSGCEAADERNCWDNFKHLIADEEFCFDASSKKMTTIQVSEQVTLMVCVEDTGIGIPFSAQDRIFMPFVQADSSTSRNYGGTGIGLSISKCLVELMGGQINFISRPQVGSTFSFTAVFGTYKKNAISDVKKHNVEDLPSSFRGQKAIVVDGKPVRAAVTRYHLKRLGIIAKVANDIKKAVALCGKNVNLTEYGRMFQPDIILVEKDSWISGEDGSFNVWQLDWKQNGHTIKLPKLILLATNISNAEFDKAKAAGFADTVIMKPLRASMIGACLQQVLGVGKKRQQGKDMVNGSTFLRGLLCGKKILVVDDNVVNRRVAAGALKKFGADVKCVESGKAALEMLQLPHSFDACFMDIQMPEMDGFEATRQIRQMESVANEQANGGSNGGNAYKSEWHLPVLAMTADVIHATYDECLKCGMDGYVSKPFEEENLYKEVAKFFKSKSISDS | 981 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele56g0112 | 981 | Gene3D | - | 415 | 656 | IPR036890 | - | |
| Lele56g0112 | 981 | SUPERFAMILY | Homodimeric domain of signal transducing histidine kinase | 337 | 417 | IPR036097 | GO:0000155|GO:0007165 | |
| Lele56g0112 | 981 | CDD | HisKA | 351 | 412 | IPR003661 | GO:0000155|GO:0007165 | |
| Lele56g0112 | 981 | SMART | CHASE_2 | 105 | 290 | IPR006189 | - | |
| Lele56g0112 | 981 | Pfam | CHASE domain | 108 | 288 | IPR006189 | - | |
| Lele56g0112 | 981 | ProSiteProfiles | Histidine kinase domain profile. | 358 | 654 | IPR005467 | - | |
| Lele56g0112 | 981 | Pfam | Response regulator receiver domain | 839 | 969 | IPR001789 | GO:0000160 | |
| Lele56g0112 | 981 | Coils | Coil | 401 | 421 | - | - | |
| Lele56g0112 | 981 | Gene3D | CHASE domain | 109 | 320 | IPR042240 | - | |
| Lele56g0112 | 981 | Pfam | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 470 | 651 | IPR003594 | - |
Showing 1 to 10 of 34 entries
Duplication type information
Functional genes information
Transcription factors information