Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0105 ATGATTGCCCTCTGCTCTTTTGGTTTGCAGTTTATATTGGCGTTCTTCACTTATCTGTTCCCAGGAGCAGAAATGTCGACGAGGGCTTCATTGAAGCCATGGCACAGGTTCATAGGGATGGTGATATTCCTAGTAGCAGTGTGCACGGCAGAGATGGGCATTGTCGAACGCTTTGAGTTTCTGAGACTTGGTAGAGACCAAGACGCTCTCATCCTCAATTTCTCTGGTCTCTTGCTATTCCTCTTTGCTGCCACTGTTGGCCTCTCTGTTATTCTCCCCTCGTATTACTGA 291 0.4742 MIALCSFGLQFILAFFTYLFPGAEMSTRASLKPWHRFIGMVIFLVAVCTAEMGIVERFEFLRLGRDQDALILNFSGLLLFLFAATVGLSVILPSYY 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0105 96 Pfam Eukaryotic cytochrome b561 1 58 IPR006593 -
Lele56g0105 96 ProSiteProfiles Cytochrome b561 domain profile. 1 91 IPR006593 -
Lele56g0105 96 Gene3D - 1 95 - -
Lele56g0105 96 PANTHER CYTOCHROME B561-RELATED 2 92 IPR043205 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0105 Lele-ChrLele56 1082776 1083182 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g0105 7 93 Chloroplast and Mitochondria Gene Families AT5G38630 35.870 3.40e-16 68.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g1372 53 21890804 21891734 Lele56g0105 56 1082776 1083182 hybridization
Lele54g1348 54 18512319 18513233 Lele56g0105 56 1082776 1083182 hybridization