Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0093 ATGGTGATGGGCTTGATGAGAAAGATTGAAGAACCAGCCATCTGCTTCTCTCTCATCATCTTCTTCTTTCACTCTCACCACCTCTTCACCATCCCAGTGGTCACTTCCTTCACTCCTGCAGAAAAGTTTGCCATTAACTGTGGCTCCTCCGGCGATCCATACACAACTTCAGATAACAGAATATGGGAACCAGATGACGCTTCCAAACTAGTTTCCCTTCCTCAAAACAGCCACACTTCCATAGCTTCCGATGCAGTTCAGGTTTCTCCTCCCCTGGAGAAAGTTCCTTATGCCACTGCTCGCCTGTCTCATTCTGAATTTACCTACTCCTTTAAGGTCACCGAAGGCCAAAAGTTTGTTCGCCTCTTCTTTTACCCATCCACACATGGCAACTTTGACCGTTCCAATGCTCTCTTCTCCGTTAAAGCAGGCCACCACACCCTCCTCAAGGACTTCAACGCTTCACTCACCGCTGATAATGATGATGATCCCGAGGAAAAAGTGTTCAGAGAGTACTGTGTTAACGTGGAACCGGGTCACAGGCTGAACATCACTTTCACTCCCAGCACCAATCATCCGGACGCCTACGCGTTTATCAATGGGATTGAGGTCGTGGCCATGCCCACCGATCTTTATTACAAAGAAGCTGATGACCCAGCGTTGAAGCTAGTTGGCAAGGGTAATCGGATTCAAGTTGATAACAACACTGCTCTGGAGACGGTATACAGAGTCAATGTTGGAGACAATGAGATTCCAGCTGGCGAAGACGCTGATGGTATGCTTCGCGATTGGCATGACGTAACTGGCCGCTATGGTGGATATGCGGTGATGCAGACCTTGCAAGATCTAAAAGATGATTCTGGTGCAACGCTGATATACCAAAATGATTCTCTCAAAGACGCAGCACCTGGGGATGTCTATTTAACTGCAAAGACCTCCGAAGATACAATGACTTGGGAGTTTAAAGTGGACTCAATGTTTGCTTATATGATCAGACTGCACTTCTGTGAGTTGAATCAGGAAGTCCAGAAGGGAGAGAGAGTTTTTCAGATACTCATAGCTGACACTTTGGCTGAGCCTCAGGTCGATGTGCTTGGTTGGCAGGAAGATAGCCGAGTTCCTGTTTATAAGGACTATGCTGTTTCGTTGAAGCAAGGAAGCTTGAAGAGGCAGAACCTTTCAATCGAGTTGCAGAAACTCCCAGAAAGCAAGTACGGTGTCCTATTGAATGGGATTGAAATTTTTAAAATCAGTGATGCTAGTGACAATCTTGGAGGACCCAACCCAGACCCAACCTCTTCACCGACCAACCCATCAAAAATCTCCAAGAAAAATACAAAAACTCCCATGCTGATTGCAATCGTGTGTGCAGCTTTAGGTGTCATTATTGTACTATCTGCGATCGGTTGTTTCTTAATACTTCGGCGAAGTACCAGACGTTCAGGGAACAGAACGGCTAAGAAATCATTAGATTTGTGCCGTAACTTTTCCATCGCAGAGATCAGAGCCGCCACAAGAGACTTTGAAAAAGATTCCATCATTGGTCATGGGGGATTTGGTGTGGTCTATAAAGGACACATTAACAAGGGGGAGACATCAACCCCTGTAGCCATCAAACGACTCAAACCAGATTCACAACAAGGGGTGGATGAGTTCCAGACAGAGATCAAGATGCTGTCCCAGTTTCGCCATGCTCACTTGGTTGATCTCATTGGCTACTGCAATGATGACAAGGAGATGATCCTGGTCTATGAATTCATGCCCCTCGGGAACCTCAGCGACCATCTTAAAGAATCTGTCAAGCGGCCACTTTCATGGAAGCAAAGGCTTGAGATCTGCATCGGAGCAGCAAAGGCACTGCTTTATCTTCATACCAACACTGGTGAGAACAAGCAGAGTGTGATCCACCGTGATGTGAAAAGTGCAAACATTTTGTTAAACGAGGAGTGGGTAGCAAAGGTTTCAGATTTCGGATTGTCCAGGATTGGGCCGAATGGCTTGTCCAAGTCGCATGTTACCACAAACGTCAAAGGCAGCATTGGGTATATAGACCCAGAATACTACTTGAGTCAGCAACTGACCCCAAAATCTGATGTTTACTCTTTTGGCGTGGTTTTACTTGAGGTTTTGTGTGGAAAGCCACCAGTATTTCGAAACGAGGAGAAGCTGCAGGGGTGTCTGGCGGAGTGGGTTAAGAAATGCTATGAGAAAGGAGAGATTGGCGAGGTGGTTGATCCATTTTTGAAAGGGGTCATAAAACCTCAGTGTCTGAATAAGTTTGTTCAAACAGCATTGGCTTGTCTGCGTGATAATGGGAAGCTTCGGCCACCGATGAGAGATGTTTTGAGGGACTTAGAGACAGTGTTGAAGATGCAAGGGAGAATGGAGGTTGAGATCCCGAGAGATGGTGGAGAGGCAAAGAATGAGGACAAAACAACTCCGACCCAAGTTACAAGAGATAAAGAAAGTGGAGTACGGTTCTCGACTTCATGTGGATCAACCACGACTGAGTCCAAGTGCAGCAGTAAGGTCACCGTCTCAAGTAGTGAGGAGGAGCAAGCTCTGGTTCCTGCAGGGGTTTTCTCTGAGCTTGCACATCCAACAGCACGATAA 2613 0.4654 MVMGLMRKIEEPAICFSLIIFFFHSHHLFTIPVVTSFTPAEKFAINCGSSGDPYTTSDNRIWEPDDASKLVSLPQNSHTSIASDAVQVSPPLEKVPYATARLSHSEFTYSFKVTEGQKFVRLFFYPSTHGNFDRSNALFSVKAGHHTLLKDFNASLTADNDDDPEEKVFREYCVNVEPGHRLNITFTPSTNHPDAYAFINGIEVVAMPTDLYYKEADDPALKLVGKGNRIQVDNNTALETVYRVNVGDNEIPAGEDADGMLRDWHDVTGRYGGYAVMQTLQDLKDDSGATLIYQNDSLKDAAPGDVYLTAKTSEDTMTWEFKVDSMFAYMIRLHFCELNQEVQKGERVFQILIADTLAEPQVDVLGWQEDSRVPVYKDYAVSLKQGSLKRQNLSIELQKLPESKYGVLLNGIEIFKISDASDNLGGPNPDPTSSPTNPSKISKKNTKTPMLIAIVCAALGVIIVLSAIGCFLILRRSTRRSGNRTAKKSLDLCRNFSIAEIRAATRDFEKDSIIGHGGFGVVYKGHINKGETSTPVAIKRLKPDSQQGVDEFQTEIKMLSQFRHAHLVDLIGYCNDDKEMILVYEFMPLGNLSDHLKESVKRPLSWKQRLEICIGAAKALLYLHTNTGENKQSVIHRDVKSANILLNEEWVAKVSDFGLSRIGPNGLSKSHVTTNVKGSIGYIDPEYYLSQQLTPKSDVYSFGVVLLEVLCGKPPVFRNEEKLQGCLAEWVKKCYEKGEIGEVVDPFLKGVIKPQCLNKFVQTALACLRDNGKLRPPMRDVLRDLETVLKMQGRMEVEIPRDGGEAKNEDKTTPTQVTRDKESGVRFSTSCGSTTTESKCSSKVTVSSSEEEQALVPAGVFSELAHPTAR 870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0093 870 MobiDBLite consensus disorder prediction 425 443 - -
Lele56g0093 870 MobiDBLite consensus disorder prediction 818 852 - -
Lele56g0093 870 SMART serkin_6 508 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele56g0093 870 PANTHER OS03G0124300 PROTEIN-RELATED 16 484 - -
Lele56g0093 870 Pfam Malectin-like domain 45 417 IPR024788 -
Lele56g0093 870 Pfam Protein tyrosine and serine/threonine kinase 510 784 IPR001245 GO:0004672|GO:0006468
Lele56g0093 870 ProSitePatterns Serine/Threonine protein kinases active-site signature. 634 646 IPR008271 GO:0004672|GO:0006468
Lele56g0093 870 MobiDBLite consensus disorder prediction 800 870 - -
Lele56g0093 870 ProSitePatterns Protein kinases ATP-binding region signature. 514 539 IPR017441 GO:0005524
Lele56g0093 870 CDD STKc_IRAK 514 786 - -
Lele56g0093 870 Gene3D Transferase(Phosphotransferase) domain 1 587 805 - -
Lele56g0093 870 MobiDBLite consensus disorder prediction 423 443 - -
Lele56g0093 870 FunFam receptor-like protein kinase FERONIA 474 586 - -
Lele56g0093 870 FunFam Receptor-like protein kinase FERONIA 587 806 - -
Lele56g0093 870 SUPERFAMILY Protein kinase-like (PK-like) 487 786 IPR011009 -
Lele56g0093 870 Gene3D - 236 418 - -
Lele56g0093 870 Gene3D - 42 208 - -
Lele56g0093 870 Gene3D Phosphorylase Kinase; domain 1 479 586 - -
Lele56g0093 870 MobiDBLite consensus disorder prediction 800 817 - -
Lele56g0093 870 FunFam FERONIA receptor-like kinase 42 208 - -
Lele56g0093 870 ProSiteProfiles Protein kinase domain profile. 508 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0093 Lele-ChrLele56 1007694 1010306 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g0093 30 870 Receptor kinase-like Gene Family AT3G51550 42.354 0.0 650
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lele56g0093 Malectin_like 1.9e-39 CL0202