Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0064 ATGGAATCTTCAGCAGACCGACTGTTGCTTTCTTCATTGAATTTTAGCGAGGTCAGCAATTCACAAGAGTGCCAAGACTTGATGACTGTGGATGAAGTGGGTAGTAGCTCTGTGTGGAGCAGAGAGCAGGATAAAGCATTTGAAAATGCTCTAGCAACTCATCCTGAAGATGCATCAGATCGATGGGAGAAGATTGCAGATGATGTACCTGGGAAAACTGTAGAAGAGATCAAACATCACTACGAGCTATTGGTTGAGGATCTTAACCAGATCGAATCTGGTTGTGTGCCTATACCTTCTTATAATTGTTCTTCGGAGGGGTCAACCAGCCATGCTAGTGATGAAGGAGGGGGCAAGAAGGGTTCTGGGAATTATAACAGTGAGTCTAATCATGGAACCAAGGCTTCAAGATCTGATCAGGAACGACGAAAGGGTATTGCTTGGACAGAAGATGAACACAGGTTATTTCTTCTTGGGTTGGAGAAGTATGGAAAAGGTGACTGGCGAAGCATATCAAGGCACTTTGTGGTGACAAGAACGCCCACTCAAGTAGCAAGCCATGCTCAAAAATACTTCATTCGTTTGAACTCCATGAATAAAGATAGAAGAAGATCCAGTATACATGATATCACCAGTGTGAACAACGGAGACATTTCAGCTCCTCAAGGACCGATCACTGGTCAAACAAACGGTTCTTCTACATCCAATGCTGCTGGCAAATCAACCAAACAAGCCCCTCAAACTCCAAACGGACCTCCAGGTGTAGGAATATATGGTGCTCCAACTATTGGGCAACCTATAGGAGGACCGCTTGTCTCTGCGGTGGGCACCCCAGTAAATCTTCCCGGACCAGCACACATGGCATATGGGATCCGAGCACCAGTGCCCGGCACAGTTGTTCCCGGTGCCTCAATGAACATGGGTCCTATGCCATACCCTATGCCACACACATCTGCTCATAGGTGA 966 0.4648 MESSADRLLLSSLNFSEVSNSQECQDLMTVDEVGSSSVWSREQDKAFENALATHPEDASDRWEKIADDVPGKTVEEIKHHYELLVEDLNQIESGCVPIPSYNCSSEGSTSHASDEGGGKKGSGNYNSESNHGTKASRSDQERRKGIAWTEDEHRLFLLGLEKYGKGDWRSISRHFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITSVNNGDISAPQGPITGQTNGSSTSNAAGKSTKQAPQTPNGPPGVGIYGAPTIGQPIGGPLVSAVGTPVNLPGPAHMAYGIRAPVPGTVVPGASMNMGPMPYPMPHTSAHR 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0064 321 SMART sant 144 194 IPR001005 -
Lele56g0064 321 SMART sant 35 87 IPR001005 -
Lele56g0064 321 SUPERFAMILY Homeodomain-like 37 92 IPR009057 -
Lele56g0064 321 ProSiteProfiles SANT domain profile. 34 89 IPR017884 -
Lele56g0064 321 ProSiteProfiles SANT domain profile. 148 196 IPR017884 -
Lele56g0064 321 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 139 196 IPR017930 -
Lele56g0064 321 FunFam transcription factor MYB1R1 146 197 - -
Lele56g0064 321 Gene3D - 146 198 - -
Lele56g0064 321 FunFam Transcription factor SRM1 31 98 - -
Lele56g0064 321 MobiDBLite consensus disorder prediction 202 257 - -
Lele56g0064 321 MobiDBLite consensus disorder prediction 103 144 - -
Lele56g0064 321 Pfam Myb-like DNA-binding domain 38 81 IPR001005 -
Lele56g0064 321 Pfam Myb-like DNA-binding domain 147 192 IPR001005 -
Lele56g0064 321 MobiDBLite consensus disorder prediction 209 249 - -
Lele56g0064 321 PANTHER TRANSCRIPTION FACTOR KUA1 35 316 - -
Lele56g0064 321 CDD SANT 39 85 IPR001005 -
Lele56g0064 321 SUPERFAMILY Homeodomain-like 142 197 IPR009057 -
Lele56g0064 321 CDD SANT 147 192 IPR001005 -
Lele56g0064 321 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 144 194 IPR006447 GO:0003677
Lele56g0064 321 Gene3D - 31 98 - -
Lele56g0064 321 ProSiteProfiles Myb-like domain profile. 140 192 IPR001005 -
Lele56g0064 321 ProSiteProfiles Myb-like domain profile. 39 85 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0064 Lele-ChrLele56 841719 847417 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele56g0064 Myb_DNA-binding 4.4e-12 CL0123