Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0019 ATGTACTTTAGGAGAATACAATGTCGAGATTGGAGGTGGGGCGTTTCGTTTCAGCCATCCAAATACTTTATTAGGCCAAGATGCTATGGTTATGCATGCTTTCAATCTCAGTGCCCTAAGACAACCGTGGAAGAATGTGTTTCGCATGATAGCATAATAAGGAGACGCCTATTGAAATCTTTTTTATATAGGGTCGCATCATCTGATAATAGTTGTACTGATCTGAACAGGAGGCCTAGTTTATATTTGAGAAGTACTCAGTTACGCTTCTACAGTTCAGAAAGTGATGGAAGGAATGCAAGTGAGGATAAACATGTAAATGCAAATGATGGAGCTCACTGTGATAAGGGAAAAAGGTGGCAAGATAAGTTTGGGGAAGATGCCAAACTCTGTAATGCTCATGCTCGACTTGGGGAACAGGATCAAGAGGAGTGGCTCAAGAATGAGAAGATTTCCATTGAAAATAAAAAAAGAGAATCACCCTTTTTAACCAGAAAGGATAAGTTCAAAAATGAGTTTCTGAGGAGGGTTGTTCCTTGGGAGAAAATAAACATTTCATGGGACACATTTCCTTACTATATTCATGAGAATACCAAAAATCTTCTGGTGGAATGTGCTGCTTCCCATTTGAGACATAATAAGGTTGCTTCTTCTTATGGTGCTGGCCTCTCATCTTCAGGTGGGAGAATATTGCTTCAGAGCGTTCCTGGTACTGAGCTCTATCGAGAAAGATTAGTTAGAGCACTTTCACAAGATCTAAAAGTTCCTTTGCTGGTGCTTGATAGCAATATCCTTGCTCCTTATTATATTGATGATGACTTATCATCATCAGAATGCGAGTCTGATGATGATAATCCAGAATCTGGGGAGGAGGCTTCTATGGAGTCAGAGGATGATGATAACAATGGCAACGAAGAAGAGTGGACTAGCAGTACTGAGGCAAAGTCAGATGCTAGTGATAACGAAGAACATGATGCAATAGCAACTGCTGAAGCAGCCCTAAAGAAGGTGAAAGCTGCTGTTCAGAAACTTGTTCCCTACAACATTGAAGACTTTGAAAAGAGGTCATCTGAAGATTCAGAAAACTCTGAGTCAACCAAATCTGAGGTTGTGAAGCCTTCTGACCAATCTGGATGCCAATTAAAGAAAGGTGACCGTGTGAAATACATTGGGCCATCTGTTCAAATGAAAGCCCACAATAGGATCATACTGGGGAAGATACTGACATCTGATGGTCCAACTAATGCTTACACTAATATCCATGGCAGATCTTTGTCCAATGGTCAACGTGGAGAGGTATATGAGGTGGAAGGGGATCAAGTTGCTGTCATCATGGACATTACCGATGATAATACAAAGGAGGGTGAGGTGGAGAAATCTAATGAACATACAGAATCACGACTTTGTTGGATACATGTTAATGACATTGAGCATGACGCTGATGCTCAAGTACAGGATTGCTACATAGCTATGGAAGCTCTATGCGAGGTTTTGGATTCCAAACAACCTCTTATTGTCTATTTTCCAGACAGTACACAGTGGTTTCATAAATCAGTCGTGAAGTCAAACAGAAGAGAGTTCTTTCTCAAGGTTCAAGAAATGTTTGACAAGTTGTCTGGTCCTGTTGTGTTGATTTGTGGAGAAAACAAAATTCTATCAGGGTCAAAAGAGAAAAAGCAATTTACAATGATACTTCCAAACTTCGGACGCGTTGGTAAGCTGCCTCTTTCTCTGAAACACTTGACTGAGGGACTTGGAGCAACAAAGAGATCGGATGATGATGAAATCCAGAAGCTTTTCACTAATGTTTTGTGCATACATCCACCTAAGGAGGAGGATCAACTTGGAACTTTTAAAAAACAACTTGAGGAAGACAGGAAAATTGTGATTTCCCGTAGTAGTTTGAATGAACTGCATAAGGTTCTTGAAGAACATGAGCTATCATGCTTGGACCTCTTGCGAGTAAATACCGACGGTGTCATTCTAACAAAGCCAAAAGCTGAAAAGGTGGTGGGCTGGGCAAAAAACAATTACTTGTCATCTTGCCCACTTCCTTATGTTAAAGGAGAACGATTGTGCCTGCCTCGTGAAAGTCTTGAAATTGCAATCTCAAGATTGAGGGATCAAGAAACTATGTCACGGAAGCCCTCTCAGGGTCTGAAGAACCTCGCAAAGGATGAGTATGAGAGCAACTTCATTTCAGCTGTAGTACCTCCTGGTGAAATTGGGGTGAAGTTTGATGACGTAGGTGCTCTTGAAGATGTGAAGAAGGCACTTAATGAACTTGTCATCCTTCCAATGAGAAGGCCAGAGCTTTTCTCTCGTGGAAACTTGTTACGGCCTTGCAAAGGAATATTACTTTTTGGTCCTCCTGGCACTGGGAAAACTCTACTGGCCAAGGCACTTGCAACAGAAGCAGGCGCAAATTTTATCAGCATAACGGGCTCAACTCTAACATCTAAGTGGTTTGGAGATGCTGAGAAACTCACCAAAGCCCTTTTCTCCTTTGCTAGCAAGCTTGCTCCTGTCATTATATTTGTTGATGAAGTTGATAGTTTGCTTGGTGCTCGAGGGGGTGCTTTTGAGCATGAAGCCACTAGAAGAATGAGGAATGAGTTCATGGCAGCTTGGGATGGATTGAGGACAAAAGAGAGTCAAAGAATCCTCATTCTTGGGGCAACAAACAGGCCTTTTGATCTTGATGATGCTGTTATACGCCGCCTACCAAGAAGGATATATGTGGATTTGCCAGATGTTGAGAATCGGATGAAGATTTTAAGTATCTTTCTTGCACAAGAAAATCTCGATCTTGATTTTCAGTTTGACAAACTTGCTAACTTGACCGAGGGATACTCTGGCAGTGATTTGAAGAACCTCTGCATTGCTGCGGCATATAGGCCTGTTCAAGAGCTACTAGAGAATGAAAAGAAGGCAAGCTACAGAGATCCAACACCGGCATTACGACCTTTAAAATTGGATGATTTTATTCATGCAAAATCTAAGGTTGGGCCATCAGTCGCCTATGATGCAGCGAGCATGAATGAGTTGAGGAAGTGGAATGAAATGTACGGAGAAGGTGGAAGTAGGACAAAATCTCCATTTGGATTTGGAAGCTAA 3117 0.4164 MYFRRIQCRDWRWGVSFQPSKYFIRPRCYGYACFQSQCPKTTVEECVSHDSIIRRRLLKSFLYRVASSDNSCTDLNRRPSLYLRSTQLRFYSSESDGRNASEDKHVNANDGAHCDKGKRWQDKFGEDAKLCNAHARLGEQDQEEWLKNEKISIENKKRESPFLTRKDKFKNEFLRRVVPWEKINISWDTFPYYIHENTKNLLVECAASHLRHNKVASSYGAGLSSSGGRILLQSVPGTELYRERLVRALSQDLKVPLLVLDSNILAPYYIDDDLSSSECESDDDNPESGEEASMESEDDDNNGNEEEWTSSTEAKSDASDNEEHDAIATAEAALKKVKAAVQKLVPYNIEDFEKRSSEDSENSESTKSEVVKPSDQSGCQLKKGDRVKYIGPSVQMKAHNRIILGKILTSDGPTNAYTNIHGRSLSNGQRGEVYEVEGDQVAVIMDITDDNTKEGEVEKSNEHTESRLCWIHVNDIEHDADAQVQDCYIAMEALCEVLDSKQPLIVYFPDSTQWFHKSVVKSNRREFFLKVQEMFDKLSGPVVLICGENKILSGSKEKKQFTMILPNFGRVGKLPLSLKHLTEGLGATKRSDDDEIQKLFTNVLCIHPPKEEDQLGTFKKQLEEDRKIVISRSSLNELHKVLEEHELSCLDLLRVNTDGVILTKPKAEKVVGWAKNNYLSSCPLPYVKGERLCLPRESLEIAISRLRDQETMSRKPSQGLKNLAKDEYESNFISAVVPPGEIGVKFDDVGALEDVKKALNELVILPMRRPELFSRGNLLRPCKGILLFGPPGTGKTLLAKALATEAGANFISITGSTLTSKWFGDAEKLTKALFSFASKLAPVIIFVDEVDSLLGARGGAFEHEATRRMRNEFMAAWDGLRTKESQRILILGATNRPFDLDDAVIRRLPRRIYVDLPDVENRMKILSIFLAQENLDLDFQFDKLANLTEGYSGSDLKNLCIAAAYRPVQELLENEKKASYRDPTPALRPLKLDDFIHAKSKVGPSVAYDAASMNELRKWNEMYGEGGSRTKSPFGFGS 1038
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0019 1038 MobiDBLite consensus disorder prediction 354 368 - -
Lele56g0019 1038 SMART AAA_5 781 918 IPR003593 -
Lele56g0019 1038 CDD AAA 783 916 - -
Lele56g0019 1038 Pfam ATPase family associated with various cellular activities (AAA) 785 915 IPR003959 GO:0005524|GO:0016887
Lele56g0019 1038 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 168 1031 - -
Lele56g0019 1038 MobiDBLite consensus disorder prediction 275 306 - -
Lele56g0019 1038 MobiDBLite consensus disorder prediction 275 323 - -
Lele56g0019 1038 ProSitePatterns AAA-protein family signature. 888 907 IPR003960 GO:0005524|GO:0016887
Lele56g0019 1038 MobiDBLite consensus disorder prediction 354 384 - -
Lele56g0019 1038 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 743 919 - -
Lele56g0019 1038 Gene3D - 917 1002 - -
Lele56g0019 1038 Gene3D - 744 1020 IPR027417 -
Lele56g0019 1038 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 744 1005 IPR027417 -
Lele56g0019 1038 Pfam AAA+ lid domain 938 973 IPR041569 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0019 Lele-ChrLele56 581662 600283 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g0019 779 979 Calmodulin-binding Proteins AT3G56690 35.922 2.57e-31 130