Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0013 ATGTTGGTGATCATGCAGCAGCAGCAGAATCCCTCTGCACTGGTGCCACTGCTCAACAACAATCCTCAGTCCTCCTCTGCCACCACCACCTCCTCTCTTAGGTCGCCGCCTTCTGCAACACCACCTTCACAGTCCCACTTATCTTCCTCACTCCCTCTTGTCGCTCCTTTCTCCGGTCCACTCCGTCAAACTCATCTTCCATCCCTTCCACCCGATCATGTAATTGGACCAGTGGTGCCCATCGCCGCCACGCACCCTTCCGGCGAGCCCTCTTTATCCACGCCACCTGCCTTCCCGTTGCCAAGAGTCCGACTCTCGGATATTGCCCAATATGACGGAGCTCCATCTCGGTCCTATGTCAAAGCAGTGGAAACACTGTCAGGGTCTTTGATGAGGCATAATGCAGCCTTGATCGAATTGGGCAGCGAGGATACTGCTCTGATGAGGTGCGGATTAGAAGGTTCCAGATTGTTTTTTCGGAGCAGGGACCATTTGGGTGGGGGGAAGGGTAGCCGTGGGGTTCACAGGTACAGGGCAGGAAGGGCTTTGGAAGATTGGCATTCATCTCCCCCATGTATGGCTGATATTTTTAGGTGCATGGGAAAGGCAGCTCGTTCTACATTGTGCGCCATCGCAAGGCATCTTCGTCTTCCAAGCGATGTTTTTAACCATTTGCTTGATGATACCCCATTGCCTGCTAATGAGGTGTCCTCATCAGTTCTTGTTGCAACCTACTCACACACTTCTTTGCCAAATGGAAAAGGTGCTATTGGAGGTGGTAAGCCAACGGTGAATGGTGAAATTGAGAAGGGTTTGTTGACATTGATATCTTCAGACGCTCCTGGTCTTCAGGTTTGTGACCCCAACGGCCGCTGGTATCTGGCAGATAGTGGGTCTGGTCCTGGGGATCTTTTGTTGCTCACAGGCAAGGCCCTTAGCCAAGCCACTGCAGGTCTTCGTCCTGCAGCATCATATAGAGCTTCTCCTGATTATTTTCTAGTTGCTAACAGTGGAGGAAGGACATGTTTTGCATTTAGTCTCATGCCACAGGGCAACGCTATATTGGATTGTTCTCCAATTGCAGCAGCTGGACATGTTATTTCCCAAAGCTGTGTTCCAATATCAGTAAGCCAGTTTATGGATGACCTTTCTGCTGAAGAAGTGATAGGCAGCCGATCTTATCATACTTATGGTACGGGAAACAATGTGAAGAAGGAACAGTCATTGAGAAGTGTTCTGTCAGATCCTTTGTCTGGCGCATTCCTTGAAGACGCCATGCTTATCTCGTGTGGGCATTCATTTGGTGGACTCATGCTAAGGAGAGTCATTGAAAATTCAAGATGTACTCTCTGCAATACAAATATTGAGACCAGTTCTCTGATCCCCAATTTTGCTCTAAGAGCAGCAGCCACAGCAGTCAAGCATGAGGATGATAGAAGGTTATTTCATAATGCTGTTCTCCGAAAGCGCAGGAAAGAAATGGGTGATCAAATGGATTCACTGAGAAGAACAAACAGGGAAAATGGTGATGTTACTGGTGATGATGGACCCCACCAGGGAGTGCAGTATCCTTTTTCTGTAAATGAAAAGGTGATAATTAAGGGTAATAGGAGAACGCCAGAAAAATTCGTTGGCAAAGAAGCTGTCATTACATCTCAGTGTCTTAATGGCTGGTACTTGCTTAAGATTATTGGAACTGGGGAGAACGTGCGCTTGCAATACCGTTCTCTTAGGAAGCTATTGAACTCACCAGCGATGGAGGACCAGTCACAGCCAGTTCAAAATAGCAGCTCTTAA 1797 0.4808 MLVIMQQQQNPSALVPLLNNNPQSSSATTTSSLRSPPSATPPSQSHLSSSLPLVAPFSGPLRQTHLPSLPPDHVIGPVVPIAATHPSGEPSLSTPPAFPLPRVRLSDIAQYDGAPSRSYVKAVETLSGSLMRHNAALIELGSEDTALMRCGLEGSRLFFRSRDHLGGGKGSRGVHRYRAGRALEDWHSSPPCMADIFRCMGKAARSTLCAIARHLRLPSDVFNHLLDDTPLPANEVSSSVLVATYSHTSLPNGKGAIGGGKPTVNGEIEKGLLTLISSDAPGLQVCDPNGRWYLADSGSGPGDLLLLTGKALSQATAGLRPAASYRASPDYFLVANSGGRTCFAFSLMPQGNAILDCSPIAAAGHVISQSCVPISVSQFMDDLSAEEVIGSRSYHTYGTGNNVKKEQSLRSVLSDPLSGAFLEDAMLISCGHSFGGLMLRRVIENSRCTLCNTNIETSSLIPNFALRAAATAVKHEDDRRLFHNAVLRKRRKEMGDQMDSLRRTNRENGDVTGDDGPHQGVQYPFSVNEKVIIKGNRRTPEKFVGKEAVITSQCLNGWYLLKIIGTGENVRLQYRSLRKLLNSPAMEDQSQPVQNSSS 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0013 598 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 62-RELATED 99 595 - -
Lele56g0013 598 MobiDBLite consensus disorder prediction 1 51 - -
Lele56g0013 598 MobiDBLite consensus disorder prediction 493 513 - -
Lele56g0013 598 MobiDBLite consensus disorder prediction 493 520 - -
Lele56g0013 598 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 407 477 IPR013083 -
Lele56g0013 598 SUPERFAMILY RING/U-box 409 475 - -
Lele56g0013 598 Coils Coil 484 504 - -
Lele56g0013 598 Gene3D - 161 397 IPR027443 -
Lele56g0013 598 SUPERFAMILY Clavaminate synthase-like 191 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0013 Lele-ChrLele56 524375 531434 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g0013 409 587 Plant U-box Gene Family AT5G05230 40.331 1.09e-38 144