Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g1470 ATGGCGGGTTTATTCTCACTAGGCGGTGGAGGTAGAGGAACGAACCAGCAGCAAGAAGAAGAAGAAGAAGAAGCACGAGGGCATCATAACCCAACCACGGAATTCCCTCCGGCCGAGACCCTATACTGGTACAAGAACGAGGATGCGTCGTCGTACAGAGGATTCGAGCTATGGAACCAGCAGCAGGAGCAGTTCATGGCAGGACAACAAGCGTACGATGATCCGTCGTCGTCGTCGAGATCCTCAGGGATGATGACGACGAGAGAGCGCCAGGATTTTCCTGCAGTGGTAAGCTCGCCTGCGGATTTCCGATGCGTGCGGGTGAACTCTATTGACGACGCGGACGAACAATTTGCTTACCAGACGGCGGTGAGCATTGGAGGGCATGTGTTCAAAGGAATTCTGTACGACCAAGGTCCTGAATATAATTACACAGCTGGAGATGTGAGCACCCCCGCCAGCGTAGGCGGAGTTCAACCATTGAACCTCATGGCCGGTGCCGCCAGCGGCCCGTCTGCTTTAGCCGCAGGCTCAATAAGTGGAGGTGCCATGGTTTTGCCAAGTGGGGGGCTTGGGGATCCTCCTTCTTTGTATCCAGCTCCACTTGACCCCTTCATGGCTGGAGGCAGTGGTGCAGCATTCCAGTTTAAAAGATATTGCACCCTTCTTGATCTAGCTAGGGCATGGGTTTCCACTTGTGCAAAGCATTATGGTAATCAAGGAAAGACTTGTGCTCGTACACGCTTGGAATCATATGCTTCGGGACCAGTGCCACTGCTGCACCCTGAATTTACTGTTAATCAACTCTCTCGTTTTGTTACTTTTGAATAG 831 0.5235 MAGLFSLGGGGRGTNQQQEEEEEEARGHHNPTTEFPPAETLYWYKNEDASSYRGFELWNQQQEQFMAGQQAYDDPSSSSRSSGMMTTRERQDFPAVVSSPADFRCVRVNSIDDADEQFAYQTAVSIGGHVFKGILYDQGPEYNYTAGDVSTPASVGGVQPLNLMAGAASGPSALAAGSISGGAMVLPSGGLGDPPSLYPAPLDPFMAGGSGAAFQFKRYCTLLDLARAWVSTCAKHYGNQGKTCARTRLESYASGPVPLLHPEFTVNQLSRFVTFE 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g1470 276 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 81 203 IPR007818 GO:0003700|GO:0006355
Lele55g1470 276 MobiDBLite consensus disorder prediction 1 39 - -
Lele55g1470 276 MobiDBLite consensus disorder prediction 16 30 - -
Lele55g1470 276 Pfam Domain of unknown function (DUF702) 75 141 - -
Lele55g1470 276 MobiDBLite consensus disorder prediction 67 88 - -
Lele55g1470 276 MobiDBLite consensus disorder prediction 67 93 - -
Lele55g1470 276 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 93 140 IPR006511 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g1470 Lele-ChrLele55 20847944 20851737 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g1470 81 210 C2H2 Transcription Factor Family AT1G19790 48.120 2.26e-27 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Lele55g1470 DUF702 6.9e-25 No_clan