Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g1467 ATGCTTCCATTCGGAAGGTCCCGCTGCTCATATCAGATCAATCTCCTCCGTTTGCGAAACACCCGTACACAGCCTCCGGTAGTCTCAATGGCTGAGGTTGCTGTATCAATAGTTGTTGAAAAGCTTTCAGAACTTCTAGTCGAACAAGCAGTGAACGCAGTTTCTGCACTAGATGGTGTGCGCAACGACGTAGAGAGGCTGAAGAATGAGTTACGATGGTTGCAATGCTTTCTGAGGGATGCCGATGCTAAACAGGAAGAAAACCAACTGGTTCGAATGCTGGTTTCCGATATTAGAGATACTGCTTTTGAAGCTGAGGAGCTAATAGAGATTTATAGGACACATGATGTATCTAAAAAACGGGAAACCTACAGCGTTGTCAGTGAAACAAAGGGGCAAAATATTACCAAAGAAAGGTTGAGACACTGGAGACAGCCATGGCCCTACACTGAAGAGTATGTAATTAAGCGTGAAGATGACATGGAATTCCTGCTGGATCAACTGCTTACAGTGGACGCTGGGCGGGTGGTTTCTGTAGTTGGTATGGGGGGTTTGGGCAAAACCACCTTGGCTAAGAAATTGTATAATCACAGCAAAATTCATAACCATTTTGATTGTAGAGCTTGGGTTTGTGTGTCCAAAGAGTACAGGATAAGAGACATTCTGCGAGGAATTCTCAAGGATGCAGATGCTCTTGGTGGAAATGAAATTGACAGATTGGAGGGGTTGCGGGAGGAGGACATGATGAACCGGCTGCATACTATCTTGGATAAGAAAAGGTATTTGGTAGTTCTTGATGATATTTGGAGCATGGAAGTTTGGGATAGCCTAGAATCTGCATTTCCCAGAGGGAAGTTGGGTAGTAAAATTCTGCTCACAACCAGAGACATGAAAATAGGTAAGCATGCTGGTGGTGGTGGTGGCAACACTCATAAACTACGAACACTGACTGAAGACGAGAGTTTGAGATTACTATGCTACAAAGCATTCCCTGGAATGAGTTGCATCCCCCCGGAGTTGGAGAATCTTGCAAGGGATGTTGTAGTGAAATGTGGTGGTTTGCCTCTGGCTGTGGTGGTGGTTGGTGGTTTATTATCAAGAAAACTTGAATCAAACAAGGAATGGTTGCGGGTGGCCGAAAATATCAGTTGGCACCTGCTGAATGAGCGAGACAGAATACGAGGGATTTTGGCCCTGAGCTACAATGACTTGCCTTCTAACTTGAAATCATGCTTTCTCTACCTAGGTCTTTTCCCAGTTGGCATCAACATTCAGACCAAAAAGTGCATGGTTCAAGTTGGCTCTGTAAGTTCGTTAGGCAAAGTCAAAACAATTCGCATCCATGATCTTCTCAGGGATATTTACTTCTCCAAAGGGCAAGAGGAATATTTTCTTCGCATATATCTGGGAAGCCTGGAGAGTTCATCAGCATCTCAGGTAAATAGGTTCCGCCGGCATGCCATACATACTTGCTATGACCGTTATGACTTCTTGAAACACAATGCTCACCATTCACGTTCCCTCCTCTTCTTCAATAGAGAATATATAGTGAAGAGAATAAGGTTCTATGACCAGCAGTACAATATGAATTTCCTGCTAGAGAAGAAACTGAATTTAATTTTTGGCAAATTCAAGCATCTCAGGGTTTTAGAGTTAGACGGTGTTCGGGTTGTTCGTTTGCCGAATACAATAGGGGACCTTATTCAGTTAAGGTATCTTGGACTGAGGAAGACTAATTTGGAAGAGGAACTTCCACCTTCCATTGGAAACTTGCTGAACCTGCAGACGCTTGATTTAAGGTACTGTTGTTTTCTTAAGAGGATACCAAATGTGATTTGGAAGATGATTAGTTTGAGGCATTTGCTTCTGTATACTCCATTTGATTCTCCAGATAGCTGTCATCTAAGAATGGATACATTAACCAATTTACAAAGCCTGCCATACATAGAAGCAGGAAACTGGATAGAAGATGGGGGTCTAGAAAAAAGAGAAGTCTTAGGCAACTGGGACTATATGAATTACCTGGAAATTGGTGAGATGGAATCCATTGCCAAACTTGAGAGGTTGCCAAAACTGAAAATGCTTGTTTTAGGGAAAGGGGCATACGATAGGCGGGAATTGATCTTCTCTGCTGATGGATTTCCAAAATTGCAAATTCTAAGGCTCAATGTTTTGAAAGAATTGGAGGAGGGGACCGTTGAGGAAAGGGCAATACCACGATTCGAGCACATCATTATTAATCGTTGCGAGAAACTGAAGAAGATACCAGAAGGACTGAAGGCTCTTTCTTCTCTCGAGGAAATAAAGATTATAGGAATGCCAGTAGAATTTGAACAGAGACTACGGACTATAGATTTGCCGGAATTCCAAAATACTCCTTCAATTGGATCAACGACTGACATTTTGGCTAATGGCCCAGAAGCTAAGATTTCAACGGCAGGCACAATGTTGGTGGTTGAGAAACCTTTCATCTTGGTAGAGGAATCATGTCCTAGTTGTGGTTTTTCTCTTCCGTTGAATAGCATGTGGTTCATTTTTCTTGTTGACTATGTGCATAATGCTAAGGTAGCACATAACGGTTGCATAACTGGAAGACAAAGTGGCTTGGACCAGGATGTTCTTCCCGTTCATTTCAAGCACAGCCATGGAGCAGGGAAGACCTACTTGTTCTTATTTAATAGGTTAAATGGCTTGTCGCCACCTCAGATTTTCAATGATAGTGATATCCAGTGGAATAGTTACATTACATATTGA 2754 0.4256 MLPFGRSRCSYQINLLRLRNTRTQPPVVSMAEVAVSIVVEKLSELLVEQAVNAVSALDGVRNDVERLKNELRWLQCFLRDADAKQEENQLVRMLVSDIRDTAFEAEELIEIYRTHDVSKKRETYSVVSETKGQNITKERLRHWRQPWPYTEEYVIKREDDMEFLLDQLLTVDAGRVVSVVGMGGLGKTTLAKKLYNHSKIHNHFDCRAWVCVSKEYRIRDILRGILKDADALGGNEIDRLEGLREEDMMNRLHTILDKKRYLVVLDDIWSMEVWDSLESAFPRGKLGSKILLTTRDMKIGKHAGGGGGNTHKLRTLTEDESLRLLCYKAFPGMSCIPPELENLARDVVVKCGGLPLAVVVVGGLLSRKLESNKEWLRVAENISWHLLNERDRIRGILALSYNDLPSNLKSCFLYLGLFPVGINIQTKKCMVQVGSVSSLGKVKTIRIHDLLRDIYFSKGQEEYFLRIYLGSLESSSASQVNRFRRHAIHTCYDRYDFLKHNAHHSRSLLFFNREYIVKRIRFYDQQYNMNFLLEKKLNLIFGKFKHLRVLELDGVRVVRLPNTIGDLIQLRYLGLRKTNLEEELPPSIGNLLNLQTLDLRYCCFLKRIPNVIWKMISLRHLLLYTPFDSPDSCHLRMDTLTNLQSLPYIEAGNWIEDGGLEKREVLGNWDYMNYLEIGEMESIAKLERLPKLKMLVLGKGAYDRRELIFSADGFPKLQILRLNVLKELEEGTVEERAIPRFEHIIINRCEKLKKIPEGLKALSSLEEIKIIGMPVEFEQRLRTIDLPEFQNTPSIGSTTDILANGPEAKISTAGTMLVVEKPFILVEESCPSCGFSLPLNSMWFIFLVDYVHNAKVAHNGCITGRQSGLDQDVLPVHFKHSHGAGKTYLFLFNRLNGLSPPQIFNDSDIQWNSYITY 917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g1467 917 PRINTS Disease resistance protein signature 589 605 - -
Lele55g1467 917 PRINTS Disease resistance protein signature 351 365 - -
Lele55g1467 917 PRINTS Disease resistance protein signature 176 191 - -
Lele55g1467 917 PRINTS Disease resistance protein signature 255 269 - -
Lele55g1467 917 PANTHER DISEASE RESISTANCE PROTEIN RP 57 771 IPR044974 GO:0006952
Lele55g1467 917 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 145 415 IPR027417 -
Lele55g1467 917 CDD RX-CC_like 31 139 IPR038005 -
Lele55g1467 917 Coils Coil 50 70 - -
Lele55g1467 917 Pfam Rx N-terminal domain 34 123 IPR041118 -
Lele55g1467 917 Pfam NB-ARC domain 157 402 IPR002182 GO:0043531
Lele55g1467 917 SUPERFAMILY L domain-like 538 775 - -
Lele55g1467 917 Gene3D - 401 435 IPR036388 -
Lele55g1467 917 FunFam Probable disease resistance protein At1g61300 141 306 - -
Lele55g1467 917 Gene3D - 315 400 IPR042197 -
Lele55g1467 917 Gene3D Ribonuclease Inhibitor 524 786 IPR032675 -
Lele55g1467 917 Gene3D - 33 138 - -
Lele55g1467 917 Gene3D - 139 305 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g1467 Lele-ChrLele55 20816181 20824160 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g1467 175 454 WRKY Transcription Factor Family AT5G45050 24.503 3.63e-08 55.8