Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele55g1456 | ATGGCACATCACAGGATGCAATCTGTAAGGTTTGGAGAAGAAATCAAATCTTCTTCTTTGAGAATAAAACATCATAGGATTAAAAATGGCACTCTAAGTGGTAACATAAAGCAGGATCAAACATGGGAAGATAAGCATATAACTGCTTCAATAGGAAGAATCAACGAAATGGTTGCCGAGGCAAGACTTTCTAAGAATCCCCAAGGGCATACTTCATTAACAAGCTCCGCAGGGTCGGTTAAATCTGGTCCTGTTTTCTTTTCAAATCCAACTGACAAGAGGATCCAAAGCACATTATCGTCGTCGATATCATCATCATTCAGTTCTAGTATCGGAATATCCGCACTGTCCAGCTCATCTGCGATGAGCGGGAAGGGCACTGGGAAGAGTCATTCTGAAGGGAAAAAACCAGAAAAGAAGAAGAAGGAGAAGGAGAAGGAGAAAGGAGCATTGTTTGCTTGTATGAGACAAAAGTCATGCAAGAACTCAAGAAAATCGCCGGAACGTGCAAGAGTTGATGAAGCATTGATCATAGAGAGAGAGCGCGTGGTGGAGAGTCTGCCACAATTCTGGGCAGATAAGTACCAACCTGCTTCCCTTAATCCCTTCGTTTGCCACAGAGAAGAAGCTCAACTTCTCAAGGGATTAGAAGGAAGGCCTAGGAAAGTAAGTGTTCCAATAACGTTCAGTCTTCATCACGTGGAACTAAACGTAAATTTAGAACCGAATGCAAAGTATGCTTTGATTGGATTAGTGAAGGAAATGAGCCGTATCTATGCAATAGCACCCCAAGATCCCAATCTTAATATCAAGTCAGATTGTCAAGTGATGGTTCTCTATGAGGTTGACAAGGTAGAACATGATATCCAGCAGATAATCCAATGGGTTATAGACCGCCACTCCAAAACATGCAAATTAATACTCTGCTGCCAAGATGATGTTGACATTCCTGAATCTCTGAGGAACCTGTTCAAAGTCATTGAAGTTCATCCCCCTACTACGCCTCAGATTATGGAGGTTCTATTTGAGATAGCAAAGAAGAAGGATATTCATCTATCAAACAATTTTGCTGCTATGATTGCTGCAAAATCTAATCAGAATCTCAGGCAAGCTATCATGGCTCTTGAGGCATGCAAAGCATTCAAATATCCATTTTTGGAAGAACAACCAATTTCAATTGGATGGGAGGATGTTATAATAGAAATTGCTTCAGAGATCATAGCCGATCCATCAAATGCATGCCAAATATCAGACAAAAGACTCCCACCTGGGACCATAGCTTTAACCAAGTTGGCTGACGAACTGCTTACTCTTGCAGTTGTAAAACGAAGTAATACTCCAAAGCAAATGAAAGATAACGTTGGACTTCGTCAAAAGAAATCAGCAAGCACTAAGAAGGGAGCTGGCAAGTATGAGAAAGTAGGGAAAGAAGCTTCTGGAAGTGATGAGGATCCAATGAAAGAAGAGCTCAAAAGAACCAAAAGGTTGGCGTCCACAAGAGAAATAGGTTCAGGCAGTTTGCAGAGGAATCCGACGACAAAGAAGAGCCATCCGATATTCAGCTTCATGGATTTCGGAGGGAAGAAGAAAACAACGGCGAGGCCTGAGATGGGAAGATATATTGAGTATCTCAAGGAAGGAGGCATGTGGGATTCCGATTCTAATAAGCCTGTCATTTATTACAACATACTAGTTCATAAGAGGGAAGGAGCCAGCCAACTCCAACTGTGGAGGGTGGACTGTGGAGCTCCGGCAATGGAGCTAGTAGCTTCACACTTATCTCCAACTCGTCCCAGAAAGAAATTTCCTTCTCACACTCCATTTCCTGGGCTCATCTCCAGAACTATATGCCATCAAATCCCACTTGAATTTTCATCCCATTTTATTACCTTTATAAATAGGAATGGTCGTTTTGAAGCGTGTGCCCGTAAAAAAGAGAGGGTCAGCGAACTAGAGTATAGCAGAGGAGTCGAAGCAGCAGAGAAACTACACACGACCTCTTCTTTGGACGATGACTCGTCTTTTTTGTCTCTCAGCGAGAAACCTGACAGGAATTTGGTTTTGCTGGATGATTATGAAGCGGAGGAGCTTGATTATGATTCCCACCCTGACCATCGAAGCGGATATGTGGCTTTACTTGGGAAGCCAAATGTTGGGAAGAGTACGCTAGCAAACCAAATGATTGGTCAAAAGTTGTCTATAGTTACACAGAAACCTCAAACAACAAGGCACCGCATTCTTGGTATATGTTCTGGCTCAGATTATCAGATAATACTTTATGATACACCTGGTGTTCTCAAGAAGGAAATGCACATGTTGGACTCCATGATGATGAAGAATGTTCGCAGTGCTGCAGTCAATGCTGATTGTGTATTAATTCTTGTTGATGCGTGTAAAGTTCCTGAAAATATTGATGAAGTGTTGAAGGAAGGTGTAGGAGATCTCAAGGATAAACCCTCCACTCTACTGATTCTTAATAAGAAGGATCTTATCAAACCTGGGGAAATTGCGAAGAAACTTGAGTGGTATCAGAAATATACTGATGTTGATGAGGTTATACCAGTTAGTGCTAAATATGGTCATGGCATTGAAGATGTCAAGGACTGGATACTGTCAAAGCTTCCCAATGGACCGGCATACTATCCAAAGGACATTGTCAGTGAGCACCCAGAAAGATTTTTTGTGGGTGAAATCATTCGAGAAAAGATCTTTATGCAGTACCGAAATGAAATACCCTATGCTTGCCAGGTGAATGTTGTAAGCTACAAGGCTCGGCCCAATGCAAAAGATTTCATACAAGTGGAAATTGTTGTTGAAAAGAATTCACAGAAGGTTATACTTATTGGAAGAGAGGGAAAGGCTTTGAAACTTCTTGCAACAGCTGCCCGTCTGGACATTGAAGACTTTCTGCAGAAGAAAGTTTATCTTGAGATTGAAGTGAAGGTGAAAGAAAATTGGCGACAAGATGAAGGGCTTCTTAAGAACTATGGATACGGGGGCCAGATACGAGTTCTGTAA | 3018 | 0.4182 | MAHHRMQSVRFGEEIKSSSLRIKHHRIKNGTLSGNIKQDQTWEDKHITASIGRINEMVAEARLSKNPQGHTSLTSSAGSVKSGPVFFSNPTDKRIQSTLSSSISSSFSSSIGISALSSSSAMSGKGTGKSHSEGKKPEKKKKEKEKEKGALFACMRQKSCKNSRKSPERARVDEALIIERERVVESLPQFWADKYQPASLNPFVCHREEAQLLKGLEGRPRKVSVPITFSLHHVELNVNLEPNAKYALIGLVKEMSRIYAIAPQDPNLNIKSDCQVMVLYEVDKVEHDIQQIIQWVIDRHSKTCKLILCCQDDVDIPESLRNLFKVIEVHPPTTPQIMEVLFEIAKKKDIHLSNNFAAMIAAKSNQNLRQAIMALEACKAFKYPFLEEQPISIGWEDVIIEIASEIIADPSNACQISDKRLPPGTIALTKLADELLTLAVVKRSNTPKQMKDNVGLRQKKSASTKKGAGKYEKVGKEASGSDEDPMKEELKRTKRLASTREIGSGSLQRNPTTKKSHPIFSFMDFGGKKKTTARPEMGRYIEYLKEGGMWDSDSNKPVIYYNILVHKREGASQLQLWRVDCGAPAMELVASHLSPTRPRKKFPSHTPFPGLISRTICHQIPLEFSSHFITFINRNGRFEACARKKERVSELEYSRGVEAAEKLHTTSSLDDDSSFLSLSEKPDRNLVLLDDYEAEELDYDSHPDHRSGYVALLGKPNVGKSTLANQMIGQKLSIVTQKPQTTRHRILGICSGSDYQIILYDTPGVLKKEMHMLDSMMMKNVRSAAVNADCVLILVDACKVPENIDEVLKEGVGDLKDKPSTLLILNKKDLIKPGEIAKKLEWYQKYTDVDEVIPVSAKYGHGIEDVKDWILSKLPNGPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEIPYACQVNVVSYKARPNAKDFIQVEIVVEKNSQKVILIGREGKALKLLATAARLDIEDFLQKKVYLEIEVKVKENWRQDEGLLKNYGYGGQIRVL | 1005 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele55g1456 | 1005 | Pfam | 50S ribosome-binding GTPase | 710 | 827 | IPR006073 | GO:0005525 | |
| Lele55g1456 | 1005 | MobiDBLite | consensus disorder prediction | 64 | 85 | - | - | |
| Lele55g1456 | 1005 | PANTHER | GTPASE ERA | 659 | 990 | IPR005662 | GO:0003723|GO:0005525 | |
| Lele55g1456 | 1005 | TIGRFAM | era: GTP-binding protein Era | 708 | 981 | IPR005662 | GO:0003723|GO:0005525 | |
| Lele55g1456 | 1005 | Gene3D | - | 887 | 1002 | IPR015946 | - | |
| Lele55g1456 | 1005 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 183 | 379 | IPR027417 | - | |
| Lele55g1456 | 1005 | MobiDBLite | consensus disorder prediction | 449 | 497 | - | - | |
| Lele55g1456 | 1005 | FunFam | replication factor C subunit 3 | 333 | 391 | - | - | |
| Lele55g1456 | 1005 | SUPERFAMILY | Prokaryotic type KH domain (KH-domain type II) | 883 | 998 | IPR009019 | GO:0003723 | |
| Lele55g1456 | 1005 | FunFam | GTPase Era | 703 | 886 | - | - |
Showing 1 to 10 of 25 entries
Duplication type information
Functional genes information
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Lele55g1456 | 55 | 20728892 | 20741641 | Lele55g1456 | 55 | 20728892 | 20741641 | ECH |
Showing 1 to 1 of 1 entries