Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g1450 ATGGCATCATCATCTTGGACACCGAGGCAAAACAAACTATTTGAACGAGCTCTGGCTTTATACGATAGGGAGACCCCTGATAGGTGGCAGAATGTTGCCAGAGAGGTGGGAAAATCTGTGGAGGAGGTCAAAAGGCATTATGAGATCCTTAAAGAAGATGTCAAACGCATAGAGCATGGTCAAGTCCCCTACCCCTACTACAGATAA 207 0.4589 MASSSWTPRQNKLFERALALYDRETPDRWQNVAREVGKSVEEVKRHYEILKEDVKRIEHGQVPYPYYR 68
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g1450 68 CDD SANT 5 51 IPR001005 -
Lele55g1450 68 SMART sant 2 53 IPR001005 -
Lele55g1450 68 FunFam Transcription factor SRM1 1 64 - -
Lele55g1450 68 Gene3D - 1 64 - -
Lele55g1450 68 ProSiteProfiles SANT domain profile. 1 55 IPR017884 -
Lele55g1450 68 SUPERFAMILY Homeodomain-like 4 58 IPR009057 -
Lele55g1450 68 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 3 67 IPR044636 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g1450 Lele-ChrLele55 20690446 20691144 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele55g1450 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele55g1450 55 20690446 20691144 Lele55g1450 55 20690446 20691144 ECH
Lele53g0048 53 381205 385112 Lele55g1450 55 20690446 20691144 hybridization
Lele54g0048 54 419807 420022 Lele55g1450 55 20690446 20691144 hybridization