Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g1439 ATGTCCTCCTCCCCTGAAACTGCTCCATCTTCAGATCGTGGTGATAATGATGGTGAAGATTATAGCCCCGGCGGTTCATCATCACAAAGCCCTCCATCACCCCCACCAACAGACCAGTGGCAGCCAGCAGATCCTACTAAAGATCCAGTTAGGTTTCCGCCGCCGCCACCATCTGGCTCTACTGATTCGCCGAACAACCAACGCTCTTCTGGTGACAATTCGTCTTCACCCGGTAAATCGTCTGAATCGCCATCGTCTTTAACACCAAAATCTTCCCACAGGAACAAGCATTCGCCTCCTCCACTACCTGATTCCAGCGAAAATAGCAGCGGCAACAAGAATGACGACAGTAGAGCAATCATCGGAACCGCCGTTGGTGTAGGATTTGTTCTTCTTATAATGATCGTCGTCTGTATCATTTGTTGCAGAAGGAAGAAGCGAAAGCATAGGTATTACAATACGGACGATGGCAAAACTGGTGATTATTACAACAGAGGACAGAACCAAAATAAATGGCACCCTGGTGGGAACGACCATGTTGTGAGGATGCAGCAATCACCGGGCAAGGGCATGCGTCCGGATAGTGGTGCGTGGGGGCCGGTTCCACCGCCTCCTCCGCCACATAGCACAGATATGAGTTCAAATTACTCACTGGGGCCACCAATGCCTCCGCCATCGCCGGGGCTGACTTTAGGGCTGAACTGCGGGACCTTCTCTTTTGAAGACTTGGCCGCGGCAACGGAGGGCTTTGCCGATAAGAATCTGATAGGACAAGGAGGTTTTGGTTACGTGCATAAGGGTGTTTTGCCTAATGGAAAAGAAGTTGCAGTGAAGAGCTTGAAAGCCGGTAGTGGCCAAGGAGAACGTGAGTTCCAAGCTGAGATTGAAATCATTAGTCGTGTTCATCATCGTCATCTTGTGTCGCTTAATGGCTACTGTATTGCTGGTGGACAACGGATGTTGGTTTATGAATTTGTTCCTAATAACACTCTTGAGCATCACCTTCATGGGCTGGAGGATGGCAACTTTGAAGCACTGGTGGATCCGTTCTTGGAAGGCAATTACAATAACCAGGAATTGTCTCTCATGGCTGCCTGTGCTTCTGCCAGCATTCGTCATTCCGGCAAGAAACGTCCTAAAATGAGCCAGATCGTAAGAGCACTGGAAGGGGATGTGTCACTGGAAGACTTAAACGATAAGGCAGGGCATCAGGGGCACCTTCTGGCATCTTCATCGAGCTCAGAGTACGATTCAAGTGCGTATCAGGCCGATATGAAGAGGTTCAGACAATTAGCTCTTGCGAGTCAGGAATTCGAAAGCAGTGAATCAAGTGGTGAAATGTCTCAGAAGCTGAATCCAAGTGGACCTGTGGCCCTGGAAATGATAACCCGATCTAAACTTGTCGAGCAGCTCAGAGATTACCAGATCCGATCCCAGCACAAGTACTCTGCTCTCACAGTCTTCTCTCCCAAACCCCATGTCAATACTCGGGTTGATGTTGCTGTGGCAATTATTTTCGCCTTATTATTCGGCATCCTTTCAGTGTTAGCCTGTGTAACCCTTTACTTCAGGCGCTTTTGGATTTTCTTGGTTGTGGTATGCCTCAGTATATCACTTTTTATACGCCTAAAAGTCTCTAGGCAAACATTGGCGAGAAAGAGAGAAAGAAGACTGCCATTCTTTCACTTTTTCTCAAATGTACAGATCATACAGTTGAGCGCAGTGAACAGCCATAAGGTTTCTGTCCTTTCTTTATTCCCTCCCTTTTTCTCTGATCAGCTTGTAAATTTTCTCAAGGAATTCAGGCTAAGATTTTCTGTAATTTGGAGATGTAATGGAAACAGGGAACGATCATATCTCACCGATGTTAACCATTGGGTTCCTAGGAGCTTACACCTTGTAACAGCTGAGGATAGAATACAGATGACAGGTATAACTTCATCAGCAGTTGCTGGCACACGAAGTAAAGTCCAAAGTATTAGCATTCTTTGA 1992 0.4704 MSSSPETAPSSDRGDNDGEDYSPGGSSSQSPPSPPPTDQWQPADPTKDPVRFPPPPPSGSTDSPNNQRSSGDNSSSPGKSSESPSSLTPKSSHRNKHSPPPLPDSSENSSGNKNDDSRAIIGTAVGVGFVLLIMIVVCIICCRRKKRKHRYYNTDDGKTGDYYNRGQNQNKWHPGGNDHVVRMQQSPGKGMRPDSGAWGPVPPPPPPHSTDMSSNYSLGPPMPPPSPGLTLGLNCGTFSFEDLAAATEGFADKNLIGQGGFGYVHKGVLPNGKEVAVKSLKAGSGQGEREFQAEIEIISRVHHRHLVSLNGYCIAGGQRMLVYEFVPNNTLEHHLHGLEDGNFEALVDPFLEGNYNNQELSLMAACASASIRHSGKKRPKMSQIVRALEGDVSLEDLNDKAGHQGHLLASSSSSEYDSSAYQADMKRFRQLALASQEFESSESSGEMSQKLNPSGPVALEMITRSKLVEQLRDYQIRSQHKYSALTVFSPKPHVNTRVDVAVAIIFALLFGILSVLACVTLYFRRFWIFLVVVCLSISLFIRLKVSRQTLARKRERRLPFFHFFSNVQIIQLSAVNSHKVSVLSLFPPFFSDQLVNFLKEFRLRFSVIWRCNGNRERSYLTDVNHWVPRSLHLVTAEDRIQMTGITSSAVAGTRSKVQSISIL 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g1439 663 Pfam Protein tyrosine and serine/threonine kinase 254 338 IPR001245 GO:0004672|GO:0006468
Lele55g1439 663 MobiDBLite consensus disorder prediction 160 174 - -
Lele55g1439 663 ProSitePatterns Protein kinases ATP-binding region signature. 256 278 IPR017441 GO:0005524
Lele55g1439 663 Gene3D Phosphorylase Kinase; domain 1 230 325 - -
Lele55g1439 663 MobiDBLite consensus disorder prediction 28 61 - -
Lele55g1439 663 SUPERFAMILY Protein kinase-like (PK-like) 219 339 IPR011009 -
Lele55g1439 663 MobiDBLite consensus disorder prediction 62 115 - -
Lele55g1439 663 MobiDBLite consensus disorder prediction 1 115 - -
Lele55g1439 663 MobiDBLite consensus disorder prediction 152 223 - -
Lele55g1439 663 FunFam proline-rich receptor-like protein kinase PERK1 228 325 - -
Lele55g1439 663 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 337 437 - -
Lele55g1439 663 ProSiteProfiles Protein kinase domain profile. 250 561 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g1439 Lele-ChrLele55 20592267 20602474 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g1439 42 337 Trihelix Transcription Factor Family AT1G23540 39.482 2.80e-45 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Lele55g1439 PK_Tyr_Ser-Thr 2.2e-14 CL0016