Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g1432 ATGCCTCCTGGTTATCTATCAAAGCTGAACGCTACCATGTACTGTCGTTTTCGAGAAGGACTAACTGGGCAACACGGGTTGCGATCTTTGCTATGTAGACATTCTTCTGCGTCTCTTTCTTCTCTTTGTTCAACTTCATATATATCTCATGCCAATCCTTCCTTTTCAAGCCGTAAGCTTAAAAATGAATTAATGGCTGCTTCAACCTCCAAATCTGTAGTGGGAGATGTTTGTTTACATAATAACCTCTCTAGCTTTAGCAATACGCTAGATTTCAAAACGCCTTTGGGTGACGGAAATCGTAAAGGTTACCTAAGAGCTCATTTGAACCTGAAAAGAAAATATTCATTAAATAGTGCTCTTAATATTAGGTATTCAACTCTTGAGGGTATTTCAAGTTTTCCTTATCGACCATGGCTGAAGAATTTCTCTAGTACATTTTGTACTTCCTACTTTGCCCGGGCAGCACACAATGTCTCATTTGACAGCAGCGCTTGTAATGAACAGCTTGAAAATTCCTCCCCTACAGTAGACGCTCACTTAAAAAATTATTTAATCTTTGTTAATAACATTAGTTGTATTACTTTCAGAACAATTGATGGTGGCGAGACTTTGAAGCTATTTTCAGGATCTAGTTACCTACCACATCCAGATAAGGAGGAGACAGGTGGAGAAGATGCTCATTTTATTTGCGCTGATGAACAAGCATTTGGTGTTGCAGATGGTGTAGGTGGTTGGGCAGAAGTTGGTGTTAATGCGGGACTGTTTTCTCGTGAACTTATGTCCAATTCAGTAAGAGCAATCCAAGAGGAACCAAAAGGTTCTATTAATCCAGCGAGGGTGTTAGAGAAGGCTCACTCAAGTACAAGAGCCAAGGGTTCATCAACAGCCTGTATCATTGCCCTTGCTGCTAAGGAGCTACATGCTATTAATTTGGGTGACAGTGGATTCATCGTGGTTAGAGATGGAAGCACCATTTTCAAGTCCCCTGTTCAACAGCATGGCTTCAATTTTACATATCAATTGGAGAGTGGCGATGGAGGTGATTTACCCAGTTCTGGCAAGGTGTTTACAGTGCCTGTTGCTGGAGGAGATGTGGTGATTGCGGGAACAGACGGATTATTTGACAACTTGTACAATAATGAAATTACAGCAGTTGTAGTACATGCAGTTAGAACGGGACTAGAACCCCAAGTAACTGCTCAGAAGATAGCAGCACTGGCCCGTCAGCGAGCACAAGACAGAAATAGGCAGACTCCATTTTCCACCGCTGCTCAAGAGGCCGGCTTCCGGTATTATGGTGGCAAGCTTGATGACATTACCGTTGTTGTATCATACGTAACCTCAGCAAATTCCTGA 1359 0.4216 MPPGYLSKLNATMYCRFREGLTGQHGLRSLLCRHSSASLSSLCSTSYISHANPSFSSRKLKNELMAASTSKSVVGDVCLHNNLSSFSNTLDFKTPLGDGNRKGYLRAHLNLKRKYSLNSALNIRYSTLEGISSFPYRPWLKNFSSTFCTSYFARAAHNVSFDSSACNEQLENSSPTVDAHLKNYLIFVNNISCITFRTIDGGETLKLFSGSSYLPHPDKEETGGEDAHFICADEQAFGVADGVGGWAEVGVNAGLFSRELMSNSVRAIQEEPKGSINPARVLEKAHSSTRAKGSSTACIIALAAKELHAINLGDSGFIVVRDGSTIFKSPVQQHGFNFTYQLESGDGGDLPSSGKVFTVPVAGGDVVIAGTDGLFDNLYNNEITAVVVHAVRTGLEPQVTAQKIAALARQRAQDRNRQTPFSTAAQEAGFRYYGGKLDDITVVVSYVTSANS 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g1432 452 SMART PP2C_SIG_2 220 447 IPR001932 -
Lele55g1432 452 Pfam Stage II sporulation protein E (SpoIIE) 235 447 IPR001932 -
Lele55g1432 452 PANTHER PROTEIN PHOSPHATASE 2C 132 451 IPR039123 -
Lele55g1432 452 FunFam 5-azacytidine resistance protein azr1 216 341 - -
Lele55g1432 452 Gene3D - 218 344 IPR036457 -
Lele55g1432 452 ProSiteProfiles PPM-type phosphatase domain profile. 211 447 IPR001932 -
Lele55g1432 452 Gene3D - 347 451 IPR036457 -
Lele55g1432 452 SUPERFAMILY PP2C-like 213 444 IPR036457 -
Lele55g1432 452 SMART PP2C_4 198 445 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g1432 Lele-ChrLele55 20557656 20560563 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0201 50 1184881 1186986 Lele55g1432 55 20557656 20560563 CCT
Lele51g0201 51 1136982 1140277 Lele55g1432 55 20557656 20560563 CCT
Lele52g0203 52 1207015 1208161 Lele55g1432 55 20557656 20560563 CCT
Lele49g0183 49 1105729 1110925 Lele55g1432 55 20557656 20560563 CCT
Lele55g1432 55 20557656 20560563 Lele55g1432 55 20557656 20560563 ECH
Lele55g1432 55 20557656 20560563 Lele56g1364 56 16800036 16802914 ECH
Lele53g0065 53 507987 510883 Lele55g1432 55 20557656 20560563 hybridization
Lele54g0067 54 549235 552359 Lele55g1432 55 20557656 20560563 hybridization