Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g1423 ATGGTTTACTACGTCGTTGCGCCTGCAATCGGTAACACCTCCGCCGTCGTCCGCAACCTCGGCTTCTATCTATCGGAGCATCCGGCGATCGTCAATTTCCGTTGGAGCCACACCCGGTCATGGGGTTCCACATGGCTATTCCTCTTCACCTCCATAGCCGCATATCTCTTCATCTCTCTCTTTCTCCATCGATTTCTGGTTCTCCTCCGCCCGACCCGCACCGTTCTTCTCGGGCCCATACCCGCTCTTCACAGCCTACTCATGTCCCTCATCTCCGCCACAATTTTCGCCGGAATATTAGTCTCCGCCGCCGCCGAGATAAGAGACACCCGTTGGTTCTGGCGACGCTCGAAGACACCTTTCCAATGGCTGCTCTGTTTTCCACTGGGCACACGACCCTCAGGACGGGTCTTCTTCTGGTCATACGTGTACTACTTGTCTCGATTCCTACACATGTGGAGGACGATGTTCACGATCCTACGACGTCGTAAACTGGTGTTGTTCCAGCTGTTCAATAACTCCATCTCGATCTTCATGTCATTCTTGTGGCTGGAATTTTCTCAGTCGTTTCAAGTGGCGGCGATCCTGGTGACGACTCTGGTGTACTCGGTGGTGTACGGATACAGATTCTGGACGGCGATGGGGCTGAGAAGCGCGTGCTTCCCACTGGTGTTGAATTGTCAAGCGGTGTTGGTGGGTTGCAACGTGGCGTGCCATGTCGGAGTGTTGTTTCTTCACTTCTTCCGCGGCGGATGCAACGGAATCGGCGCCTGGATCTTTAATTCGGTGCTTAACGTCGGTGTTCTGTTGGTGTTTCTGAATTTTTACGTGAGATTACAGCAGGCCGATGCCGGGAGAAGCGGTAAGGTTGAGGGAGAGTTCACGCCTCATGCTTGTGGCCATCAAAGGTTGGCGAGCAGTGTGGTACCAGAAATGGACAAGACAATAATTAGTTGA 957 0.5319 MVYYVVAPAIGNTSAVVRNLGFYLSEHPAIVNFRWSHTRSWGSTWLFLFTSIAAYLFISLFLHRFLVLLRPTRTVLLGPIPALHSLLMSLISATIFAGILVSAAAEIRDTRWFWRRSKTPFQWLLCFPLGTRPSGRVFFWSYVYYLSRFLHMWRTMFTILRRRKLVLFQLFNNSISIFMSFLWLEFSQSFQVAAILVTTLVYSVVYGYRFWTAMGLRSACFPLVLNCQAVLVGCNVACHVGVLFLHFFRGGCNGIGAWIFNSVLNVGVLLVFLNFYVRLQQADAGRSGKVEGEFTPHACGHQRLASSVVPEMDKTIIS 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g1423 318 Pfam GNS1/SUR4 family 43 278 IPR002076 GO:0009922|GO:0016020
Lele55g1423 318 PANTHER FATTY ACID ACYL TRANSFERASE-RELATED 24 278 IPR002076 GO:0009922|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g1423 Lele-ChrLele55 20483816 20484772 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g1423 13 265 Acyl Lipid Metabolism Gene Families AT4G36830 67.704 1.68e-121 349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele55g1423 55 20483816 20484772 Lele49g0189 49 1129608 1132689 CCT
Lele55g1423 55 20483816 20484772 Lele50g0205 50 1206234 1207838 CCT
Lele55g1423 55 20483816 20484772 Lele51g0205 51 1155735 1157314 CCT
Lele55g1423 55 20483816 20484772 Lele52g0208 52 1226869 1228496 CCT
Lele55g1423 55 20483816 20484772 Lele55g1423 55 20483816 20484772 ECH
Lele55g1423 55 20483816 20484772 Lele56g1355 56 16721885 16722841 ECH
Lele53g0075 53 582019 582800 Lele55g1423 55 20483816 20484772 hybridization