Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g1419 ATGACAAATAACAGTGGGAACGATGTCATCCACTATAGAGTCACGGATCCCAGTGACGACCCCGTTAACCCGAAACCCAGAACTCTGAGATACGTAGCCTCCGTGATCCAAGCCAAAGTGAGTGGATCCCCTTCCAAACAGACATGCTCATCAAGCTTGCCAGACCCCTTTCACAGCAGCCTCACCGCCATTGATGCCCGAGGTGTTGAAGCCCACATTGCTCACAACGCTTGCTTGATGATCTACAAGGCAAGCAACATAATCATCCATGGACTTCGGGTGCACCACTGCAAGGCTCAAGATCCGGGAATGGTGATGGGTGGTGAAGGGAAGGTCATATCTCTGGGTCATGCGGATGGAGATGAAACCAGACTGGTTTCGGCTTCCAAGATTTGGATAGATCACAACACTCTCTACAGATGCTTCGATGGCCTTCTTGACGTCACGAGAGGTTCCACCAACGTGACAGTGTCCAATTACTAG 483 0.5072 MTNNSGNDVIHYRVTDPSDDPVNPKPRTLRYVASVIQAKVSGSPSKQTCSSSLPDPFHSSLTAIDARGVEAHIAHNACLMIYKASNIIIHGLRVHHCKAQDPGMVMGGEGKVISLGHADGDETRLVSASKIWIDHNTLYRCFDGLLDVTRGSTNVTVSNY 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g1419 160 SUPERFAMILY Pectin lyase-like 11 159 IPR011050 -
Lele55g1419 160 MobiDBLite consensus disorder prediction 1 24 - -
Lele55g1419 160 PRINTS Pollen allergen Amb family signature 55 71 IPR018082 -
Lele55g1419 160 PRINTS Pollen allergen Amb family signature 18 43 IPR018082 -
Lele55g1419 160 PRINTS Pollen allergen Amb family signature 119 140 IPR018082 -
Lele55g1419 160 PANTHER PECTATE LYASE 18-RELATED 5 159 IPR045032 GO:0030570
Lele55g1419 160 Gene3D - 1 160 IPR012334 -
Lele55g1419 160 Pfam Pectate lyase 66 159 IPR002022 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g1419 Lele-ChrLele55 20462593 20463170 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g1419 1 159 Polysaccharide Lyase AT5G09280 56.875 4.84e-59 184