Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g1418 ATGGCGTATCGCTTCTTCTTCCTTTTCTCTGCAAATCTTTTTCTTTCTGTAATTCTTATCTTTCCCACTTCACATAGAGCATCTCAACCACAGAACAATAACAAAGGAGCAAACTTTTCATGCCCTGTTGATTCACCTTCTTCCTGTGAAACATACGTCTCATACTTTGCTCAATCTCCCAATTTTCTGAGCATAACAAACATATCTGATTTATTTGGGATGAGTCCTCTGCCAATAGCAAGGGCAAGCAACATAGTGTTTGACGATAACTATAAGCTGATTCCTGGCCAGCTCCTACTTCTACCTATAACTTGTGGCTGCACAGGAAATCATTCATTCGCTAACATCTCCTATTCCATGAAGGAAGGTGATAGCTACCACTTTCTTTCAACCTCTTTGTTTGAAAATCTCACCAATTTGCAAGCAGTGGAAGCTTTAGGTACTAATCTTGACCCAAGTCGCTTACTAGTAGGGGCTCGTGTAACTTTCCCTTTGTTCTGCGGTTGCCCTTCAAAGACCCAGTTGCAGAAGGGGATCAAGTTTCTAATCACCTATGTGTGGCAACCCCATGACAATTTGTCCAACGTAAGTTCAAAGTTTAATGCCTCTTCAATGGACATAGTAACCGCAAATAACTATATGGACTTCGCAAATTCAGCCAGCCTTCAAGTTTTGATCCCTGTTAGATGCTTACCTGCACTTTCCCAACCTTCCCCTTCATCTCAGAAGGACGACAGAAAAAAGCATCTTCCAATTTTCACTGGTACTTTCTTGGGATTTGCTGTTCTTATTGTTCTTTTAGCGATTCTACTATATGCTTACCGTATGAGGAAGAAAAAGATGGGTTTGAGTAGGAAAACTTTGAGTTTGGAGACTGCAGATAAGCTACTTCATGGGGTTTCTTGCTATGTAAGTAAGCCCACCATGTATGAAGCAGGTGTGATCATGGAAGCTACCAAGAAGCTTAATGAAAGGTGCAAGATTGGGAAATCAGTGTACAGAGCCAGAATTGAAGGGCAGGTTGTGGCAGTTAAGAAAGTGAGGGACCAAAATGCCAAGGAGGAGTTGAGAATGATGCAGAAGATGAATCACACAAATCTGGTGAAATTAAGGGGTGTGTCTTCAGACAATGAAGGAAATTACTTCCTAGTTTATGAATATGCCGAAAATGGGTCTCTTGATAATTGGCTTTATCCTAGGTCTTCTTCTTCTTCAAGCTCTATGTCGTTTCTCACATGGAATCAGAGGATAAGCATAGCACTAGATGTCGCCATGGGTCTGCAATACCTGCACGATCACACTCAACCAAGAATAGTCCATAGAAACATCACGACAAGTAATATCCTTCTGGACTCCAAATTCAAGGCCAAGATTGCTAATTTCTCCATGGCTAGAACTTGCACGAATCTCGTGATGCTCAAAATAGACGTTTTCGAATTCGGGGTTGTTCTGTTGGAGTTGATCACAGGGATGAAAAGCATAGAATCGAATGAAAAAGGGGAGGTGATGATGCTGTGGAAGGAATTTATGGGGATATTTAATTTGGAAGAGGGAAGAGAAGAGAGACTCAGAAAATGGATGGATCCTCAGCTTGGAAGTTTATATCCCATTGATGATGCTCTTGGCTTGGCTTCTCTGGCACTGGCTTGCATTGTGGGGAAGTCTATGTCAAGACCATCAATGGGAGAAATCGTTCTGAGCCTCTCTCTTCTCACTCAATCATCATCTGATGCTGCCGCCTTCAAGGGATCTGGCACATTAGATTTCGAGGTTGCTTCACTAAACAGTCCTATCACAGCTCGTTGA 1806 0.4208 MAYRFFFLFSANLFLSVILIFPTSHRASQPQNNNKGANFSCPVDSPSSCETYVSYFAQSPNFLSITNISDLFGMSPLPIARASNIVFDDNYKLIPGQLLLLPITCGCTGNHSFANISYSMKEGDSYHFLSTSLFENLTNLQAVEALGTNLDPSRLLVGARVTFPLFCGCPSKTQLQKGIKFLITYVWQPHDNLSNVSSKFNASSMDIVTANNYMDFANSASLQVLIPVRCLPALSQPSPSSQKDDRKKHLPIFTGTFLGFAVLIVLLAILLYAYRMRKKKMGLSRKTLSLETADKLLHGVSCYVSKPTMYEAGVIMEATKKLNERCKIGKSVYRARIEGQVVAVKKVRDQNAKEELRMMQKMNHTNLVKLRGVSSDNEGNYFLVYEYAENGSLDNWLYPRSSSSSSSMSFLTWNQRISIALDVAMGLQYLHDHTQPRIVHRNITTSNILLDSKFKAKIANFSMARTCTNLVMLKIDVFEFGVVLLELITGMKSIESNEKGEVMMLWKEFMGIFNLEEGREERLRKWMDPQLGSLYPIDDALGLASLALACIVGKSMSRPSMGEIVLSLSLLTQSSSDAAAFKGSGTLDFEVASLNSPITAR 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g1418 601 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 15 576 - -
Lele55g1418 601 ProSiteProfiles Protein kinase domain profile. 290 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele55g1418 601 SUPERFAMILY Protein kinase-like (PK-like) 306 568 IPR011009 -
Lele55g1418 601 Pfam Protein tyrosine and serine/threonine kinase 339 468 IPR001245 GO:0004672|GO:0006468
Lele55g1418 601 Gene3D Phosphorylase Kinase; domain 1 318 388 - -
Lele55g1418 601 Gene3D Transferase(Phosphotransferase) domain 1 389 469 - -
Lele55g1418 601 Gene3D Transferase(Phosphotransferase) domain 1 470 584 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g1418 Lele-ChrLele55 20460212 20462017 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g1418 40 577 Receptor kinase-like Gene Family AT3G21630 30.769 9.02e-69 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Lele55g1418 PK_Tyr_Ser-Thr 5.5e-24 CL0016