Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g1410 ATGGCTGAAATTAGGCTTACTAGGGTAGAGCAAGGTCAAACCAAGATAAAAAATGTTCCAATCGCTGTCTCCCCAGATGGTTTTTGGTGTTGCCCTTCTCCAGTTGTGTTTCAAAAAAGTCTGAAATCTCAAAACCCTCTCAATAAAACCAAACCCTCCTCGTCACCACCACCTCAAAAAATTAGTATCCAGAAAAAGCCAATCCAAGTTAGCGAGAGACGACCAGCACCTGCCCCACCAAGATCAATGGTTTCTGATGATCAACTGTATGTTGCTCCTGAAAGACATCAAGTTGGTACATCTATGCTCACAGACAGATCAGAGAGACCCAAAATTGAGAATTTACCTAGAAGGGTGGCTATTGAGTTTGGTGAGGCTGGAACTTGTGATATGAAGGTGGTTCTACTTGGAAAGCAGGGGTTTTGTGTGAAGTTGAGCGTGCACAGGGATGTGCTCAAAGAGAAGAGTAGTTTCTTTGCTGATAAACTCTCTGCACAATCGGAATTGTCATGTCTCCAAATTGATGATTGTGAGGATGTTGAAATATATGTTGAGACTGTTGGACTAATGTACTGCAAGGAAATGAAGCAGCGGTTGATGAAACAAAGTGTTCCTCGCATACTTCGGACACTCAGGGTTGCAGAACTTCTTGGCTTCACCAGCTGTATCCAGTCATGCTTGGAGTACTTGGAGGCAGCTCCGTGGGTTGGAGATGAAGAAGAAGAAAAAGTGGTCTCAACAGTTCTACGACTCCAAGGAGAAGGAGTTGGGGTCAACCCTGTGTTGAAACGAGTTTTCTCTGATATCACCAGGGCCACAAATGATACTCTATCCCACATCATCGAACTCGTTCTCACGAGTAAGGAGGAAAAAGGACGCCGAGAGATGAAAACCATAGTTCTGAAACTCCTTAAAGAGAACAACAATGTTCCAAGCCATTCAGGATCTCCAGACATCTGTAAAGAAACGATTTACCGATCATGCAGAAGCTGCTTGGATTCTCTATTGGCTCTGTTTAGGCAGGCTGCAGAACTAGAGGTGGCTGATAAATCTTCCAGTAACAAAGAACCTACGCTAAAACACATAGCTGTTGAAGCTGATAACTTGTCATGGTTGCTAGAGATACTAGCCAACAAACAAGCTGCAGATGAATTTGCAGTGATATGGGCGAACCAGCAGGAATTGGCTGTTCTTCATGAGAAGCTACCTATCATATCCCGTTATTATGTTAGTTGCATCTCAGCGAGATTATACGTTGGCATAGGAAGGGCGGAGTTGTTACCATCCAAGGACACACGTCAGTTGTTGTTACAGACATGGTTACAACCTTTGATCAATGACTTCTGCTGGTTACAACATGGATGCAGGTCGTTTGATAGTAAGGTTGTGGAGGAAGGAATTGGGAGGACTATTCTCACTCTACCTCTGGAGGATCAGCAAAGTATTATGCTTTCTTGGGTGGGAAGTTTTTTGAAGGTTGGTGACAAATGTCCAAACCTTCAGAAAGCTTTTGAGGTGTGGTGGCGGAGAACTTTCACAAGACCTTATGTGGAAGGACAAGGTAACAATAATGTGGGATCTGATACTAGTTTTTTCAATGTTGTCTAA 1608 0.4347 MAEIRLTRVEQGQTKIKNVPIAVSPDGFWCCPSPVVFQKSLKSQNPLNKTKPSSSPPPQKISIQKKPIQVSERRPAPAPPRSMVSDDQLYVAPERHQVGTSMLTDRSERPKIENLPRRVAIEFGEAGTCDMKVVLLGKQGFCVKLSVHRDVLKEKSSFFADKLSAQSELSCLQIDDCEDVEIYVETVGLMYCKEMKQRLMKQSVPRILRTLRVAELLGFTSCIQSCLEYLEAAPWVGDEEEEKVVSTVLRLQGEGVGVNPVLKRVFSDITRATNDTLSHIIELVLTSKEEKGRREMKTIVLKLLKENNNVPSHSGSPDICKETIYRSCRSCLDSLLALFRQAAELEVADKSSSNKEPTLKHIAVEADNLSWLLEILANKQAADEFAVIWANQQELAVLHEKLPIISRYYVSCISARLYVGIGRAELLPSKDTRQLLLQTWLQPLINDFCWLQHGCRSFDSKVVEEGIGRTILTLPLEDQQSIMLSWVGSFLKVGDKCPNLQKAFEVWWRRTFTRPYVEGQGNNNVGSDTSFFNVV 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g1410 535 PANTHER OSJNBA0011J08.25 PROTEIN-RELATED 118 521 IPR038920 -
Lele55g1410 535 MobiDBLite consensus disorder prediction 42 84 - -
Lele55g1410 535 MobiDBLite consensus disorder prediction 42 66 - -
Lele55g1410 535 Gene3D Potassium Channel Kv1.1; Chain A 123 249 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g1410 Lele-ChrLele55 20402876 20405624 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0223 50 1323449 1331938 Lele55g1410 55 20402876 20405624 CCT
Lele51g0224 51 1257819 1266158 Lele55g1410 55 20402876 20405624 CCT
Lele52g0226 52 1343219 1351820 Lele55g1410 55 20402876 20405624 CCT
Lele49g0208 49 1237238 1240611 Lele55g1410 55 20402876 20405624 CCT
Lele55g1410 55 20402876 20405624 Lele55g1410 55 20402876 20405624 ECH
Lele53g0085 53 655842 658577 Lele55g1410 55 20402876 20405624 hybridization
Lele54g0087 54 727906 730658 Lele55g1410 55 20402876 20405624 hybridization