Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g1402 ATGAATGAAAAAGAAGAAACATACAGAAACAAGGAGAGCAGAGGAGGCGAGGGCGATGCCGGCGATTTTGGTGGCGTCGGAGCACTTGTGAGCGAGGTCCTTGAGATGGGGGTGAAGAGAGCAAGTGAGCCTTGGTGCACAAGCTTCCAAGCCGAAGGCCTTGGAAATGGAGTGGGAAGATTTGAGCTACTTAAATTTCTGAGTACCTATGATGAATTACTTCTCCAACTGCCCCAGCCATTCATTTCTTCGACGATTGCAGATGCTCGAAAGAAGGTGATTGGTAATGCTGTTTGTTCAAAACCCAGTACAAACCAATTCAATTTCCATCAAGAGATGTCCTATCACCGGAGGAACTTCGTTATTGTGCTCACGATCTTCATCGTCAACTCAACAAGAGCAGAAAAGCCGGGCGACTGTGATCGCAGTTGTGGAAAGTATTCCGTGCCGTATCCCTTCGGATTCTCTGAGAAATGCCAGATCAAATTAAATTGCAGCGGCAGCCATATGGAAATTGGGGGATTCCAGGTGGAGAAAGTAACCCCTAGTAGTATCTTCGTCAATCTTCCTGTGAAATGCAACCGAAGCATGGGATCTATCCAACGGCTTTTCAGTAAAAACTTCGCTCCCACACGGAACAATAGCCTTCTGGTGCGAAGTTGTTCGTCTCAGCAGGGCAGCTGCTTTATACCCGCCAGTCTCACGGGCAGTCTATTCAAATTGGAGAATTGCTATAGTGGTAATATCAGTTGCTTTTTGCAAAAAAAGGATGATATATATTTTCTAACGCGAGCGGAAGTAAATCAGGCTATGTGCAAGTTGATATCTGCGATTGCAATCGAGCAAGGCAAAGACCCGACGATTTCGCTCCATCTTCAGGTGCTTGAATTGGGTTGGTGGCTTGAAGGTCCGCCCGGATGCTCTGAGAATGCAAGCCTTACCACAGTCCGAGCCGGCGGCGGGAAGACCGGGTACCGGTGCCGATGTCATGAACGTTACATCGGAGATGGCTTCAAGAACGGCACTGCTTGCCGGAAAGTTTCACGGTGCAGAGCCTCAACACTAATGACTGATGGATGTGGAAAAGCAACTAAAATCGGTGTTCTTGTTGGAGGGATCGTTGCTCTAGTTTTCATCCTGACTGGTGTGTGTCTTCGATGTTACTTTGCTAGGCGCCGTTATACTTGTTTGAGAAAACAAATGACAGTAAAGCGCCTATTACGTGAAGCTGCAGGAAACTCTACTGTTCCTTTTTACCCATACAAAGAAATAGAAAAGGCCACTAATTTTTTCTCTGGGGAACAGAGGCTGGGAACTGGGGCTTTTGGTACGGTATATGCAGGAATACTACACGATAACGAATGTGTGGCAATAAAAAAGATCAAGTACAGAGACACCAACAGTGTTGACCGAGTTATGAACGAGATCAAACTTCTTTCTTCAATAATAACGGCCCTGAAAGTGGTTGATTTTGCACGACCTCATAGTGAGGTTAATTTGGCTGCACTTGCTGTGGATAGAATCAGAAGAGGTTCAGTGGATGAGATCATAGATCCTTTTCTTGAGCCTCACAGGGATGCTTGGACACTCTACTCTGTTCACAAGTTGGCTGAGCTGGCATTTAGATGCCTTGCTTATCATAGTGACATGAGACCTACTATGTTGGAAGTAGCGGAGGAGCTGGAACAAATCAAACGCAGTGGATGGGCAACAATGGAAGAAACTCTATGCACGGCATCATCGGTTGGATCCTCGTGTTCATCACCTCGTATTGGAAGTGAGAAGTCGATGGATCGTATTATTTCTCTTAAAAGAGCGGAACGAGGGAGCAAGAGATCAATGAGTCAAAAGAGGATGGATAAAATGCAGCATTCTGTGGAAGAAGTGAAGGATAGCTCTCCTATATCAGTGCATGATCCTCGGTTAAGTGGACAAAGCTCACCCTCAGCAAACAGCTTGTTGGGAAATGTAGTTCAGTGA 1980 0.4601 MNEKEETYRNKESRGGEGDAGDFGGVGALVSEVLEMGVKRASEPWCTSFQAEGLGNGVGRFELLKFLSTYDELLLQLPQPFISSTIADARKKVIGNAVCSKPSTNQFNFHQEMSYHRRNFVIVLTIFIVNSTRAEKPGDCDRSCGKYSVPYPFGFSEKCQIKLNCSGSHMEIGGFQVEKVTPSSIFVNLPVKCNRSMGSIQRLFSKNFAPTRNNSLLVRSCSSQQGSCFIPASLTGSLFKLENCYSGNISCFLQKKDDIYFLTRAEVNQAMCKLISAIAIEQGKDPTISLHLQVLELGWWLEGPPGCSENASLTTVRAGGGKTGYRCRCHERYIGDGFKNGTACRKVSRCRASTLMTDGCGKATKIGVLVGGIVALVFILTGVCLRCYFARRRYTCLRKQMTVKRLLREAAGNSTVPFYPYKEIEKATNFFSGEQRLGTGAFGTVYAGILHDNECVAIKKIKYRDTNSVDRVMNEIKLLSSIITALKVVDFARPHSEVNLAALAVDRIRRGSVDEIIDPFLEPHRDAWTLYSVHKLAELAFRCLAYHSDMRPTMLEVAEELEQIKRSGWATMEETLCTASSVGSSCSSPRIGSEKSMDRIISLKRAERGSKRSMSQKRMDKMQHSVEEVKDSSPISVHDPRLSGQSSPSANSLLGNVVQ 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g1402 659 Gene3D Phosphorylase Kinase; domain 1 402 482 - -
Lele55g1402 659 MobiDBLite consensus disorder prediction 1 23 - -
Lele55g1402 659 MobiDBLite consensus disorder prediction 1 18 - -
Lele55g1402 659 MobiDBLite consensus disorder prediction 638 659 - -
Lele55g1402 659 SUPERFAMILY Protein kinase-like (PK-like) 409 520 IPR011009 -
Lele55g1402 659 ProSiteProfiles Protein kinase domain profile. 431 659 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele55g1402 659 MobiDBLite consensus disorder prediction 607 659 - -
Lele55g1402 659 ProSitePatterns Protein kinases ATP-binding region signature. 437 460 IPR017441 GO:0005524
Lele55g1402 659 Gene3D Transferase(Phosphotransferase) domain 1 483 582 - -
Lele55g1402 659 MobiDBLite consensus disorder prediction 607 635 - -
Lele55g1402 659 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 127 481 IPR044652 GO:0004672
Lele55g1402 659 Pfam Protein tyrosine and serine/threonine kinase 434 497 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g1402 Lele-ChrLele55 20346425 20353055 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g1402 478 657 Receptor kinase-like Gene Family AT2G23450 58.333 8.54e-55 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Lele55g1402 PK_Tyr_Ser-Thr 1.1e-05 CL0016