Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g1394 ATGGTCAGACCAAATAAAGCTCCTTATAAGCTTCAGCGTTTGTCTAATTGTCTCTTGCAACGGTTTGCTTTGCTTCAGAAGGTGATGAAGGCCACCATGGCTATGAAGTATTATTACAACACTTTGGCGTTGCTATTTTCTCTTCTGTATCATTGTGTGGCTGCTGAACATGATGGGTTGTCAGGAGCGTCTTTTATATTTGGAGATTCATTGGTAGATGCAGGAAACAATAATTACCTTTCAACTCTTTCAAAGGCAAATATCCCACCTAATGGTATCGATTTCAAGGCCTCTGGTGGAAGTCCCACTGGTCGATACACTAATGGAAGAACCATGGGTGATATTGTTGGAGAGGAGCTTGGACAACAAAATTATGCAGTCCCATTTTTGGCTCCAAACGCAACCGGCAAAGCTTTGCTGTATGGAGTAAACTACGCTTCAGGAGGAGGAGGGATTCTTAACGCAACTGGAAGAATATTTGTTAATAGGATTGGAATGGATGTTCAGATAGATTACTTCAGCATAACAAGAAAAGAGTTGGATAAATTGCTAGGCAAAGAAAAAGCGAGGGAATACATTATGAAGAAATCCATTTTCTCAATCACAGTTGGAGCAAATGATTTCCTCAACAACTATCTTCTCCCAGTTCTCTCCATCGGAGCCAGAATCTCTCAGAGCCCAGACGCCTTCATAGACGACATGATCAGCCACTTCAGATCCCAGCTTACTAGACTTTACCAAATGGATGCTCGGAAATTTGTGATCGGAAACGTTGGTCCTATAGGATGCATTCCCTACCAGAAAACGATAAACCAGTTGAACGAAGATGAGTGTGTGGATTTGGCTAACAAGCTCGCTCTTAAATATAATGCACGCCTCAAGGATTTGCTTGCTGAGCTTACTGATAACCTTCCTGGAGCCATCTTCGTAAATGCGAATGTCTACGACTTAGTCTTAGAACTCATCAAAAACTACAAAAACCATGGGTTTGTGACAGCAAGCAAAGCGTGCTGTGGAAATGGGGGCCAATTTGCAGGAATAATACCGTGTGGACCAACATCAAGCATGTGCTCAGATAGGAACAAGCATGTATTCTGGGATCCTTATCATCCGAGTGAAGCAGCAAACCTAATACTCGCCAAACAGCTTCTCGATGGAGACAAGAGATCCATATCTCCTATGAATCTTAGGCAACTTCGAGACCTCTGA 1209 0.426 MVRPNKAPYKLQRLSNCLLQRFALLQKVMKATMAMKYYYNTLALLFSLLYHCVAAEHDGLSGASFIFGDSLVDAGNNNYLSTLSKANIPPNGIDFKASGGSPTGRYTNGRTMGDIVGEELGQQNYAVPFLAPNATGKALLYGVNYASGGGGILNATGRIFVNRIGMDVQIDYFSITRKELDKLLGKEKAREYIMKKSIFSITVGANDFLNNYLLPVLSIGARISQSPDAFIDDMISHFRSQLTRLYQMDARKFVIGNVGPIGCIPYQKTINQLNEDECVDLANKLALKYNARLKDLLAELTDNLPGAIFVNANVYDLVLELIKNYKNHGFVTASKACCGNGGQFAGIIPCGPTSSMCSDRNKHVFWDPYHPSEAANLILAKQLLDGDKRSISPMNLRQLRDL 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g1394 402 Pfam GDSL-like Lipase/Acylhydrolase 65 382 IPR001087 GO:0016788
Lele55g1394 402 CDD SGNH_plant_lipase_like 63 387 IPR035669 -
Lele55g1394 402 SUPERFAMILY SGNH hydrolase 67 385 - -
Lele55g1394 402 Gene3D SGNH hydrolase 61 387 IPR036514 -
Lele55g1394 402 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE-RELATED 50 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g1394 Lele-ChrLele55 20302862 20304691 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g1394 63 399 Acyl Lipid Metabolism Gene Families AT4G10950 32.544 6.92e-62 203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0230 49 1360214 1365108 Lele55g1394 55 20302862 20304691 CCT
Lele53g0101 53 744333 746138 Lele55g1394 55 20302862 20304691 hybridization
Lele54g0102 54 813284 814924 Lele55g1394 55 20302862 20304691 hybridization