Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g1382 ATGATTCAAGAACTGTGGGGTGGTTCTTCTGGTTTTATATCATCTGGAGATAGGAAAATCTCCATTAACTCAGCTTCTGTTCTTGCACCTCCCTTACCATCTCCGTCTCTGCCTTCTTCTGCCGCCGCCGCTACCACCTCTTGTGGTGGAGCTGCTGGTAATACCGCCGCTGCCACCTCGTCGAATTCAGAGAACCAGAACTTGAGGTGTCCTCGATGCGATTCATCGAACACGAAATTTTGTTACTACAACAACTACAATCTCACCCAGCCTCGCCACTTCTGCAAGACATGTCGCCGGTACTGGACCAAAGGAGGTGCTCTGAGAAACGTTCCAATTGGAGGTGGTTGCCGGAAAAATAAGACCGTCAGCGCGTCGTCCAACTCCGTGGCGGCGAAGGCGAGTGTGGGCGTGGCTAAGATGAAAACGGCAGTGTCTGAGCTTGGAAATAGGTCATCAGGGCTTGGTGGCGGCGGCGTCTTCGATCATCAGGAACTTCCGGCAAGCCCAATTTTGTGGGGCTCGCCACAAAATTCTCATGTGTTGGATTTGCTGAGAGCTAGCCAGAACCATAACCCTAATCCTAACCCTAGCCCTTGTCCGAACAATCCCATACCTAATATTGCTATGACTATGAAGGAAGAAGGGAATTTGATAAGATCCCACATGGTGACTGAACCAATGGGCTCTAATGGCCTTCTGAATAATGTTCCTCCAACCTCAGGCTTTGATCCTTCACTTGGTCTCACGAGCTCTTTCTGGAGAAACAACAATCTCGATCATCATCATCAGCCAGCAGCTCATCATCATCAACCACAAAATGGAGGATTTACATTCGGCGGCGAGCACCAAAACAGTGGGATCCAAGAGCTCTACCAGAGACTCAGGTCTTCATCTTCTTCAGCTAACTATGGCAGAGACGACTCTTCATCGCTATTTCTGAGCAACAACATGGCTTCTTCTTCTTCTTTATCATCATCTTCCTCTGTAGCCATTGTGGATTCAACTACTACTCCAGCTAATAACGGGAGTGGAATTGGAATGGGGTACTGGAATCAACCTCTTTTCTGGTCTGATCTTCCAACGACCAATGGTGCTCATCCGTAA 1107 0.486 MIQELWGGSSGFISSGDRKISINSASVLAPPLPSPSLPSSAAAATTSCGGAAGNTAAATSSNSENQNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKTVSASSNSVAAKASVGVAKMKTAVSELGNRSSGLGGGGVFDHQELPASPILWGSPQNSHVLDLLRASQNHNPNPNPSPCPNNPIPNIAMTMKEEGNLIRSHMVTEPMGSNGLLNNVPPTSGFDPSLGLTSSFWRNNNLDHHHQPAAHHHQPQNGGFTFGGEHQNSGIQELYQRLRSSSSSANYGRDDSSSLFLSNNMASSSSLSSSSSVAIVDSTTTPANNGSGIGMGYWNQPLFWSDLPTTNGAHP 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g1382 368 MobiDBLite consensus disorder prediction 255 284 - -
Lele55g1382 368 Pfam Dof domain, zinc finger 66 122 IPR003851 GO:0003677|GO:0006355
Lele55g1382 368 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 59 295 IPR045174 GO:0003700|GO:0006355
Lele55g1382 368 ProSiteProfiles Zinc finger Dof-type profile. 68 122 IPR003851 GO:0003677|GO:0006355
Lele55g1382 368 ProSitePatterns Zinc finger Dof-type signature. 70 106 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g1382 Lele-ChrLele55 20235556 20236662 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g1382 64 176 C2C2-Dof Transcription Factor Family AT1G51700 52.586 4.09e-33 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele55g1382 zf-Dof 2.9e-32 No_clan