Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g1380 ATGTCATCATCGAAAACTCCGTGTGCAGCGTGCAAGCTTCAGAGGCGAAAATGCACTCAAGAATGCGTCTTCGCACCATACTTCCCACCGGACAACCCTCGCAAGTTCCATAACGTCCACCAGGTGTTCGGCGCCAGCAACGTTTCTAAGCTTCTCTCGGAGCTCAACGTGGCTCAACGCGAAGAAGCCGTCAGGTCTTTGGCTTACGAAGCCGAGGCTCGGCTCCAAGACCCAGTCTACGGCTGCGTCGGCCTCATCTCTGCGCTCCAGCAGAGGCTCAGGCAAGTACAAAATGAAGTCGACAAAGCGAGGAAGGAGCTCGCTACTTATATAGGCCCTCAAGCTCTACAGCCCATGGTTCCCGTTTTAGATCCTCATCATGGAATGGTCCCGTTACAACCTCACCACCAGGGCAATATTTATAGTCCTTCCGTTTTCCCGTACAATAACATGCCGCCACAGGCCATGGCGGCGCGAGGCGGGGGAGGACAATTGGTGATTCGCGAACCTCAGCAGCAGCAGCAGCATCGTGAAGAGCAGCAGATGTTGGGGTCGCAGTTAGCGACGGATATGGAGGTGAGACAGGTGCAGGAGTTGTTTGGTATTTATGATCATCAGCAACAACAACCGCCGCCGCCGCCGCAGCAGAAAGAGTTTATGAGGTATGGTGGTGGAGCCGGAGTTGAAATGGGCTCAGTTTCCGGGAGTGGATTTAATCAACCTCCAGAGATGTCGCCTTCGCTTGCTCTGAACACATATGACAACCCTTTCCATTCTGTACAACTACAGCAAGGCCAAGGAGGAGATCATCAGCAGAATCAGCATCGCCATCTTCAAGAGCAGCTGCTTCTACCGCCGCACCAGAATCAGCCTCTTCACCATCAGCTTCAAGAGCAGCTACTTTTATCTCCGCAGCCACCGCACCATCAGCTTCAGGAGCAGATGCTTCTACCGCTGCAGCAACCACAACCGCAACCGCAACCGCCGCAGGATCAGCATCAACATCATCAGCTTGAGGAGCAGCTGCTTCTACCGCCGCAGCAAGAGCAATCGGAAGTCGTGGAGGGTAGGAGCGTCAGTCCTTCTGCTTGA 1092 0.5421 MSSSKTPCAACKLQRRKCTQECVFAPYFPPDNPRKFHNVHQVFGASNVSKLLSELNVAQREEAVRSLAYEAEARLQDPVYGCVGLISALQQRLRQVQNEVDKARKELATYIGPQALQPMVPVLDPHHGMVPLQPHHQGNIYSPSVFPYNNMPPQAMAARGGGGQLVIREPQQQQQHREEQQMLGSQLATDMEVRQVQELFGIYDHQQQQPPPPPQQKEFMRYGGGAGVEMGSVSGSGFNQPPEMSPSLALNTYDNPFHSVQLQQGQGGDHQQNQHRHLQEQLLLPPHQNQPLHHQLQEQLLLSPQPPHHQLQEQMLLPLQQPQPQPQPPQDQHQHHQLEEQLLLPPQQEQSEVVEGRSVSPSA 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g1380 363 MobiDBLite consensus disorder prediction 341 363 - -
Lele55g1380 363 MobiDBLite consensus disorder prediction 224 253 - -
Lele55g1380 363 MobiDBLite consensus disorder prediction 233 253 - -
Lele55g1380 363 ProSiteProfiles LOB domain profile. 6 107 IPR004883 -
Lele55g1380 363 Coils Coil 86 106 - -
Lele55g1380 363 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 216 - -
Lele55g1380 363 Pfam Lateral organ boundaries (LOB) domain 7 104 IPR004883 -
Lele55g1380 363 MobiDBLite consensus disorder prediction 318 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g1380 Lele-ChrLele55 20222673 20223764 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g1380 1 292 AS2 family AT5G66870 45.066 1.06e-63 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele55g1380 LOB 1.4e-40 No_clan