Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g1378 ATGGAGTGTGCCATTAACAAGCTTTGTTTTCTTTTCTTGTTCTGGACAGTGTTCCTTAGTCGTCTTGTCTTCTGTCAACTTAATTACAGGTTCTATGATTCTACTTGTCCGAACCTAACCGGTATCGTTCGATACAATGTCTGGTCAGCCATTTCCAATGATTCCAGAATTGCAGCTTCTCTCTTGCGTCTTCACTTCCATGATTGTTTTGTCAACGGATGTGATGGGTCTGTGCTCCTTGATGATACCAGCACGTTCAAGGGTGAAAAGAATGCACTTCCTAATAAAAATTCATTAAGAGGATTTGAAGTAATTGACACAATCAAGTCTGCTTTAGAGAAGGCATGCCCATCCACAGTGTCATGTGCTGATATAGTTACTCTAGCTGCCAGGGACGCTGTTTCTATTAGTGGAGGTCCATTTTGGCCTGTACCTCTTGGTCGCAGAGATGGCACAACAGCAAATGAGACTGAGGCTAATAATTTGCCATCACCTTTTGAGTCCCTTCAAAACATCATTGACAAGTTCATCAATAAGGGACTTGCTGTTAATGATGTAGCTACCCTCTCAGGTGCCCACAGCTTTGGTTTTGCGCAGTGCTTTACGTTCAAGACAAGGCTGTTCAACTTTGAAGGCACAGCAGGCAAATCTGATCCAGCAATGGAAGCTTCACTTGTTCAAACTCTGCAGAAACTATGCCCTAACCAGGATGATTCTGACACAAAGTTGGCTCCGTTGGATCCAGTGACGACCAACAGATTTGATAACATGTACTATAGGAACCTCGTGAACAATTCAGGATTGCTTCAGTCAGATCAGGCTCTTCTGGGTGATAACAGAACTGCTTCTTTAGTGCTGAATTATAGCAAGTATCCTTTTCTGTTCTTGAGGGACTTTGCTGTTTCCATGGAGAAGATGGGACGCATTGGTGTTCTCACTGGACAACAAGGTGTGATCAGGAAGAACTGTAGGGTGGTCAACTAG 984 0.435 MECAINKLCFLFLFWTVFLSRLVFCQLNYRFYDSTCPNLTGIVRYNVWSAISNDSRIAASLLRLHFHDCFVNGCDGSVLLDDTSTFKGEKNALPNKNSLRGFEVIDTIKSALEKACPSTVSCADIVTLAARDAVSISGGPFWPVPLGRRDGTTANETEANNLPSPFESLQNIIDKFINKGLAVNDVATLSGAHSFGFAQCFTFKTRLFNFEGTAGKSDPAMEASLVQTLQKLCPNQDDSDTKLAPLDPVTTNRFDNMYYRNLVNNSGLLQSDQALLGDNRTASLVLNYSKYPFLFLRDFAVSMEKMGRIGVLTGQQGVIRKNCRVVN 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g1378 327 Gene3D - 30 327 - -
Lele55g1378 327 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Lele55g1378 327 PANTHER PEROXIDASE 72-RELATED 25 326 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele55g1378 327 FunFam Peroxidase 163 306 - -
Lele55g1378 327 Pfam Peroxidase 44 289 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele55g1378 327 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
Lele55g1378 327 SUPERFAMILY Heme-dependent peroxidases 26 327 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lele55g1378 327 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele55g1378 327 PRINTS Haem peroxidase superfamily signature 247 262 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele55g1378 327 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele55g1378 327 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele55g1378 327 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele55g1378 327 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele55g1378 327 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele55g1378 327 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele55g1378 327 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele55g1378 327 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele55g1378 327 PRINTS Plant peroxidase signature 245 260 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele55g1378 327 PRINTS Plant peroxidase signature 301 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele55g1378 327 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele55g1378 327 PRINTS Plant peroxidase signature 261 278 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele55g1378 327 ProSiteProfiles Plant heme peroxidase family profile. 26 327 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele55g1378 327 FunFam Peroxidase 30 178 - -
Lele55g1378 327 CDD secretory_peroxidase 26 326 IPR033905 GO:0004601|GO:0042744
Lele55g1378 327 Gene3D Peroxidase, domain 2 163 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g1378 Lele-ChrLele55 20210226 20212053 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g1378 27 323 Peroxidase AT1G49570 64.667 2.55e-139 397