Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g1362 ATGGACGTGGATGACAGAAGCATGGACATGATGGCAATGATGATGCAGATGGAAAAGTTTCCTGAATTCTCTGAACCCTTTTACCCATCAGAACCTCCATTCGCCGCCGCCGCCGCCAGTATGCCCAAACTCTCCAATAACACTATCAATCATCCTCCACCTAATAATAATCCCTTCGTGGCCAACACTATTAATCCAATCCCAGAACTCATGACACGACACCTAGTTCATCAACCCAACAAAGACGTTGGGTTCAGGAATAATATTACTGATAATAATAATCCCAAGGCTAGTTCTTCTTCTTCATCTTCTGAGAGGAAGAATTCTATGGCGGTCATGAGAGAGATGATATTTCGTATAGCAGTGATGCAACCCATTCACATCGACCCGGAATCCATCAAGCCTCCGAAGAGAAGGAACGTGAAGATATCGAAGGATCCGCAAAGCGTGGCTGCGAGGCACAGGAGGGAGAGAATCAGCGAGAGGATTAGGATTCTGCAGAGATTAGTTCCTGGAGGGACAAAAATGGACACGGCGTCAATGTTGGACGAAGCTATTCATTACGTTAAGTTCTTGAAGAAGCAAGTTAAGACGCTGGAACAAGCAGGAGCGAGTAGAGCCGTGGGTTTTGGGGGACCTACTAGCTTCAATATGAATAATAATTATTCTACTTTCATGAAGGATTATCACCAACCTTCTCAGATGATGGTGGGTAGTTCTATGCAAATGTTAAGCTGA 738 0.4472 MDVDDRSMDMMAMMMQMEKFPEFSEPFYPSEPPFAAAAASMPKLSNNTINHPPPNNNPFVANTINPIPELMTRHLVHQPNKDVGFRNNITDNNNPKASSSSSSSERKNSMAVMREMIFRIAVMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVKTLEQAGASRAVGFGGPTSFNMNNNYSTFMKDYHQPSQMMVGSSMQMLS 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g1362 245 MobiDBLite consensus disorder prediction 82 108 - -
Lele55g1362 245 FunFam BHLH transcription factor 146 208 - -
Lele55g1362 245 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 22 242 IPR045843 GO:0003700|GO:0006355
Lele55g1362 245 Coils Coil 182 202 - -
Lele55g1362 245 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 143 192 IPR011598 GO:0046983
Lele55g1362 245 SMART finulus 149 198 IPR011598 GO:0046983
Lele55g1362 245 MobiDBLite consensus disorder prediction 83 108 - -
Lele55g1362 245 Pfam Helix-loop-helix DNA-binding domain 153 192 IPR011598 GO:0046983
Lele55g1362 245 Gene3D - 142 207 IPR036638 GO:0046983
Lele55g1362 245 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 147 202 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g1362 Lele-ChrLele55 20007201 20007938 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g1362 1 212 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G50330 54.867 2.91e-48 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele55g1362 HLH 1.5e-06 No_clan