Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g1353 ATGATACAAAAACTGCATTTAGTTCCTTCATATTCTCAGCAAGCGAAGAAGTTGCTAAGCGTAGGGTTCTTCACGGGAAAATCTAAGATACTTAAAATGACTTTCGTTAAGGAAGAAGCGCCCAAAACCCAAGCTGCAGGTCATCATAAAGAAGTTAGTCATAAGAGTCTCTTACAAAGCGATGCTCTTTATCAGTATATACTGGAAACCAGTGTTTATCCAAGAGAGCATGAGTGCTTGAAGGAGCTGCGCGACTTGACGACAAAACACCCCTGGAACTTGTTAGCTGTGTCTGCTGACGAGGGTCAATTTCTGAACTTGTTGCTGAAGCTCATGAATGCCAAGAACACCATCGAAATTGGCGTTTTCACTGGTTACTCTCTTCTCGCCACCGCCCTTGCCCTTCCAGAAGACGGAAAGATATTGGCTTTGGACGTCAACCGAGCAGATTATGAGTTGGGATTGCCTGTGATTGAAAAAGCAGGCGTTGCTCACAAGATTGACTTCAGAGAAGGGCCTGCTCTTCCTGTTCTTGACCACTTGCTCACTGATGAAAAGAACAAGGGAGCGTTCGATTTCATATTTGTGGATGCGGATAAGAACAATTATTTGAACTACCACAAGAGAGCGATTGAGTTGGTGAAGGTTGGGGGATTGATAGGCTACGACAACACCCTCTGGAACGGGTCTGTTGCCGACCCACCAGAAGTGCCTCAATTGGATTACATCAAGTATTATCGTGGGTTTGTGTTGGAGCTCAACAAGGCTTTGGCCCTTGACTCTAGGGTTGAGATCTGTCAGCTTCCTATTGGTGATGGCATTACCCTGTGCCGACGCATCATCTGA 846 0.4563 MIQKLHLVPSYSQQAKKLLSVGFFTGKSKILKMTFVKEEAPKTQAAGHHKEVSHKSLLQSDALYQYILETSVYPREHECLKELRDLTTKHPWNLLAVSADEGQFLNLLLKLMNAKNTIEIGVFTGYSLLATALALPEDGKILALDVNRADYELGLPVIEKAGVAHKIDFREGPALPVLDHLLTDEKNKGAFDFIFVDADKNNYLNYHKRAIELVKVGGLIGYDNTLWNGSVADPPEVPQLDYIKYYRGFVLELNKALALDSRVEICQLPIGDGITLCRRII 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g1353 281 Pfam O-methyltransferase 69 280 IPR002935 GO:0008171
Lele55g1353 281 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 60 279 IPR029063 -
Lele55g1353 281 Gene3D Vaccinia Virus protein VP39 46 281 IPR029063 -
Lele55g1353 281 CDD AdoMet_MTases 118 220 - -
Lele55g1353 281 PANTHER O-METHYLTRANSFERASE-RELATED 52 280 - -
Lele55g1353 281 FunFam Caffeoyl-CoA O-methyltransferase 1 48 281 - -
Lele55g1353 281 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 56 280 IPR002935 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g1353 Lele-ChrLele55 19945949 19947443 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g1353 49 280 Monolignol Biosynthesis Gene Families AT4G34050 78.017 4.03e-142 399