Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g1352 ATGACTTCCGTTAAGGAAGAAGCCCCGAAAACCCAAGCAGATCAGGGACGTCCAGATGAAGCGAATCATAAGAGTCTCTTACAGAGCGATGCTCTTTATCAGGCAAGAGCTGCGCGACTTGACGACAAAACACCCCTGACATTGGCTTTGGATGTCAACCGAGCAGATTATGAGTTAGGATTGCCTGTGATTGAGAAAGCAGGCGTTGCTCATAAAATTGACTTCGGAGACTCGCTGATGAGGGTGATTGAGTTGGTGAAGGTTGGGGGAGGGATCGGCTACGACAACACCCTCTGGAACGGCTCTGTTGCGGACCCACCAGAAGTTCCTCAGTTGGATTACATCAAATACTATCGTGGGTTTTTGTTGGAGCTCCGAGCTCCACAAGGCCTTGGCCCTTGA 402 0.5025 MTSVKEEAPKTQADQGRPDEANHKSLLQSDALYQARAARLDDKTPLTLALDVNRADYELGLPVIEKAGVAHKIDFGDSLMRVIELVKVGGGIGYDNTLWNGSVADPPEVPQLDYIKYYRGFLLELRAPQGLGP 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g1352 133 MobiDBLite consensus disorder prediction 1 24 - -
Lele55g1352 133 Pfam O-methyltransferase 48 76 IPR002935 GO:0008171
Lele55g1352 133 Pfam O-methyltransferase 81 112 IPR002935 GO:0008171
Lele55g1352 133 MobiDBLite consensus disorder prediction 10 24 - -
Lele55g1352 133 PANTHER O-METHYLTRANSFERASE-RELATED 81 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g1352 Lele-ChrLele55 19942762 19944234 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g1352 48 133 Monolignol Biosynthesis Gene Families AT4G34050 47.500 1.07e-28 104