Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g1349 ATGGCGTCGTCGAAGCCTTCGCCTTCCGCCTCTGCTGACGCACTGGCCTCTCCCAATGGCCAATCGACAAAGAGAGAGCAAGACACTGATTATACTCCTAAGGATGTGCAATCGGTTATTGATTCTTTGAAAGAACAAGTTGCTGCTGAGAGGGGTATTTCAATAAAGAAAATAATGGAAGAAAGTAAAGCAAAGCTGGTTGGTGTTACAAACCATCTCTATCAGTTATCAATGGAAAGAACCTGCAGCAGTATTGGTACACAGAGAAGTCTGGACCTACTGACAAGAAGGCAACAAGATGCAATTGCTATGCACAATGATATTCATGCAAGTAAAGGAGATAAGGAGAGCAATGGCTATCATGAAGATAACCATGCTTCTACGGCTGTTCTTCTAGGTTCTAATGTAGCTGTAAAAAATGCTGTTCGCCCTGTTAAACTACCTGAAGTAAAAAGATTACCTCCATACACTACATGGATTTTTCTGGACAGAAATCAAAGAATGACTGAGGATCAATCAGTAGTAGGTCGAAGGCGAATTTATTATGATCAAAATGGTGGAGAAGCACTTATTTGCAGTGATAGTGAGGAGGAAATAATAGAGGATAAAGAAGAAAGAGAATTTGTAGAATCGGAAGATTATATACTTAGCATGACTGTAAAAAATTTTGGTTTGTCTGATCTTGTTGTGGAATCACTGGCCCGGTGTTTTTCTAGAAACGCTTGTGACATTAAGGCAAGATATGAAGTTCTCAGTCGTGAAAATGCTGAAAAAAGTTCCCAAAATGGAAATTCGTTTCTGGACAAGGATCTTGAAGCAGCTCTTGATTCCTTTGACAACCTCTTTTGTCGAAGATGTCTTGCTTTTGATTGTAGATTGCATGGTTGTTCACAGGATCTCATCTTCCCTGCTGAGAAACAACCTCCGTGGATGCCTCCTGATGCTGAAAATGAACCATGTGGACCAAATTGTTTTCAATTGGTGCTGAAGTCTGAAAGATTTGCCAAAGTGACCTCTTCTGCCCTAGGTGATGTTGAAGAGAAATGCTCAAGTGGTGCTGGGGTGCAAAAATCTTCTAGGAAGAAGTTGTGTTCTCCATCTGCTAGGAGGCGAATAAAGTGCAGCCGAAGTGAAAGCGCTTCCTCAAATGCAAAGAACATATCTGAGAGTAGTGACTCAGAGAATGGCCCAGGACAGAATTCAGCTTCACCTTCCCAGTCAATACCTAAAACTAAAGCTATGGGGAAAAGTGGAGTTAGTAAGAGGAACAGTAAGCGAGTAGCAGAACGTGTTCTAGTTTCCATGCAGAAGAGGCAGAAGAAAACAGTTGCGTCTGATTCTGATTCCATTGGCGAAGCTCTTGATCATTCATCAAATGAGATGGTTCCTGACCCCCCTGTCACAAATAGTGATGAGAGCCTGAGGAAAGAAGAGTGTGCAAATGAGAATATATGCAATCAAGAATTCACTGATATTAAATCATGGAAAACTCTTGAAAAAGCGCTTCTGGAGAAAGGGATGGAAATATTTGGTAGAAACAGCTGTTTCATAGCGAGGAATCTCTTAACTGGTATGAAGACATGCTGGGAGGTTTTCCAATATATAAATTGCAATGAGGGAAAGATGCCAGGTCCTGTTGGTGATGCTGCAAATTCCCTTCTGGAAGGCTATTCTAAGGGTAACAACGAACTGAGACGAAGATCAAGGTTTTTACGTAGAAGAGGAAGAGTCCGTCGATTGAAGTATACCTGGAAATCTGCTGCTTATCATTCAATTAGGAAAAGAATTACAGAGAGAAAGGATCAGCCCTGTCGTCAATATAACCCATGTGGTTGCCAAACAGCTTGTGGAAAGCAGTGTCCTTGTCTTCAAAATGGAACCTGCTGTGAGAAGTATTGTGGATGCCCCAAGAGTTGCAAGAATCGATTTCGTGGTTGTCATTGTGCTAAGAGCCAATGCCGAAGTCGACAATGCCCATGCTTTGCTGCAGATAGGGAATGTGATCCTGATGTTTGTAGGAATTGTTGGGTTGGCTGTGGTGATGGCACTCTTGGGATTCCTAGCCAAAGGGGTGATAATTACGAATGTAGGAATATGAAACTTCTTCTCAAACAGCAGCAAAGGGTTCTTCTTGGAAGGTCGGATGTATCTGGATGGGGAGCCTTCTTAAAGAACAGTGTTGGGAAGCATGAATACCTTGGAGAGTATACTGGAGAGCTAATTTCGCATAGGGAGGCAGATAAGCGTGGAAAGATATATGATCGTGAGAATTCATCTTTTCTATTTAATCTGAATGATCAGTTTGTTCTCGATGCTTATCGGAAGGGCGACAAATTGAAGTTTGCCAATCATTCTCCTGATCCGAATTGCTATGCAAAGGTTATAATGGTGGCTGGGGATCACAGGGTAGGCATTTTTGCCAAGGAACGGATTAATGCAGGGGAGGAACTGTTTTATGATTATCGCTATGAACCGGATAGGGCTCCTGCCTGGGCTCGGAAGCCCGAGGCATCTGGCTCAAAAAAAGAGGATGGTGCTCCTTCAAGTGGTCGTGCAAAGAAGCTTGCTTAA 2571 0.4251 MASSKPSPSASADALASPNGQSTKREQDTDYTPKDVQSVIDSLKEQVAAERGISIKKIMEESKAKLVGVTNHLYQLSMERTCSSIGTQRSLDLLTRRQQDAIAMHNDIHASKGDKESNGYHEDNHASTAVLLGSNVAVKNAVRPVKLPEVKRLPPYTTWIFLDRNQRMTEDQSVVGRRRIYYDQNGGEALICSDSEEEIIEDKEEREFVESEDYILSMTVKNFGLSDLVVESLARCFSRNACDIKARYEVLSRENAEKSSQNGNSFLDKDLEAALDSFDNLFCRRCLAFDCRLHGCSQDLIFPAEKQPPWMPPDAENEPCGPNCFQLVLKSERFAKVTSSALGDVEEKCSSGAGVQKSSRKKLCSPSARRRIKCSRSESASSNAKNISESSDSENGPGQNSASPSQSIPKTKAMGKSGVSKRNSKRVAERVLVSMQKRQKKTVASDSDSIGEALDHSSNEMVPDPPVTNSDESLRKEECANENICNQEFTDIKSWKTLEKALLEKGMEIFGRNSCFIARNLLTGMKTCWEVFQYINCNEGKMPGPVGDAANSLLEGYSKGNNELRRRSRFLRRRGRVRRLKYTWKSAAYHSIRKRITERKDQPCRQYNPCGCQTACGKQCPCLQNGTCCEKYCGCPKSCKNRFRGCHCAKSQCRSRQCPCFAADRECDPDVCRNCWVGCGDGTLGIPSQRGDNYECRNMKLLLKQQQRVLLGRSDVSGWGAFLKNSVGKHEYLGEYTGELISHREADKRGKIYDRENSSFLFNLNDQFVLDAYRKGDKLKFANHSPDPNCYAKVIMVAGDHRVGIFAKERINAGEELFYDYRYEPDRAPAWARKPEASGSKKEDGAPSSGRAKKLA 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g1349 856 Gene3D SET domain 607 824 IPR046341 -
Lele55g1349 856 Pfam SET domain 718 821 IPR001214 GO:0005515
Lele55g1349 856 SMART CXC_2 641 678 IPR033467 -
Lele55g1349 856 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 856 IPR025778 GO:0031519
Lele55g1349 856 MobiDBLite consensus disorder prediction 422 445 - -
Lele55g1349 856 CDD SET_EZH 707 823 - -
Lele55g1349 856 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 27 854 IPR045318 GO:0006338|GO:0018024
Lele55g1349 856 FunFam Putative histone-lysine N-methyltransferase EZH2 607 824 - -
Lele55g1349 856 ProSiteProfiles SET domain profile. 707 822 IPR001214 GO:0005515
Lele55g1349 856 Pfam CXC domain 645 676 IPR041355 -
Lele55g1349 856 ProSiteProfiles CXC domain profile. 593 692 IPR026489 -
Lele55g1349 856 MobiDBLite consensus disorder prediction 360 475 - -
Lele55g1349 856 MobiDBLite consensus disorder prediction 1 34 - -
Lele55g1349 856 Coils Coil 192 212 - -
Lele55g1349 856 MobiDBLite consensus disorder prediction 377 413 - -
Lele55g1349 856 MobiDBLite consensus disorder prediction 830 849 - -
Lele55g1349 856 SMART set_7 707 828 IPR001214 GO:0005515
Lele55g1349 856 SUPERFAMILY SET domain 608 825 IPR046341 -
Lele55g1349 856 MobiDBLite consensus disorder prediction 830 856 - -
Lele55g1349 856 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g1349 Lele-ChrLele55 19905572 19922037 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g1349 696 825 C2H2 Transcription Factor Family AT2G23740 27.211 1.02e-09 60.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lele55g1349 SET 4.8e-11 No_clan