Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g1341 ATGCCTCATTCCAAAACTCTCTTTCCCCTCTTCTTCTTGTGCTTCTCTCTCATCGCCACCGTCCTCTCCGATCAATCTTCTCCGGCTTCCTCCAAACTTCTCCTCTCCTCCGACGCCGCTTCTTTGCTCTCTTTCAAGTCCAAAGCCGACCTCGACAACAAGCTCCTCTATTCCCTTCATGAGCGCTTCGATTACTGTCAATGGCAAGGCGTCAAGTGCGCACATGGCGGCCGAGTGGTTCGCTTCTACCTTCAGGGCTCTGGCCTTCGCGGCGTCTTCGCTTCCTATACCCTCTCTCGTCTCGACCAGCTTCGAGTCCTCTGCCTCCGCAATAACTCCCTCTCCGGTCCCATTCCCGATCTCTCTCCCCTCTTCAACCTCAAGGCTATCCTTCTCGACAATAATTTCTTCTCTGGTTCGTTACCTCCCTCGTTTCTTCTACTTCATCGCCTTCGTACTCTTTCTCTCTCTTATAACAATCTCACCGGTTCAATCCCTGTCGAGTTAGTTAATTTGGACCGTTTAGTAACCCTCCGCCTTGACTCGAACCGCTTTGATGGAACCGTTCCGCCGTTGAACCAGTCCTCCCTTCTTATCTTCAATGTCTCCGGCAATAACCTCACAGGGCCGATCCCGGCAACTGTCGCCCTTGCTCGTTTCCACACGGCGTCTTTTTCGGGGAATCCGGGTCTATGCGGGGACATTATTTCCAAAGCATGTGTTCATCCTAGGCCTCGAATCTTTGGTTCTTCTCCCAATGCCTCTCCCTTATTGGGGCAAAGCGCTGAATCACAGGGCAACATCGTCGTTTCTTCGCTGACTGGTAAGAAGCACAAGAGTAACGGCCTGATCCTTGGGTCCACCATTGGTGCGTCGATTCTGATTGCGTCTTTTCTAGGGATTATCGCGGTGGTTAGGAAACGGAGTATTTCGAGCAATTTAGAAAGCCTAAAAATGGCGGCTACGGAAGCTATGGATGCTCCTCCGGGGAAGAAAACAGAGGAAATTGATGGAGCTGATGATCATCATAATAGAGATCATTTGGTGTTCTGTTGCGGGGAGGCACAATTGTATACGCTGGAGCAGTTAATGAGAGGGTCGGCGGAGTTTCTGGGAAGGGGTAGCATTGGGACTACGTACAAAGCAGTGGTGGATGGGAGATTCACTTTGACAGTCAAGAGGCTAGATGCTGGGAAGACTGCAAGAACAAGTGACCAAGAGTTTAAGAGGCATATGGAAATGGTGGGTCAGCTTCGGCATCTAAATTTAGTTCCTGTTAGAGCTTATTTTCAGGCTGAAGCAGAGAGGCTGGTGATCTATGATTATCAATCTAATGGCAGCCTCTTCAACCTCATTCATGGTTCAAGATCAGCAAGAGCAAAGCCTCTTCACTGGACATCATGCTTGAAGATAGCTGAAGACATAGCTCATGGAATTGCATATATACACCAAACATCAAGATTAATCCACGGCAACCTAAAGTCCTCTAATGTTCTTCTTGGGGCAGACTTTGAAGCTTGTGTTACAGACTATAGTTTGTTCCTCCTTGCAGACTCTTCATCCAGTGATGATCCTGATTCTGCTGCCTATAAAGCACCCGAAACTCGCAACACTAATGGCCCCCCTACTTCTAAATCTGATGTCTATACATTTGGGGTGCTTCTTCTAGAGCTTCTAACTTCTAAATACCCTTCTCAGCATCCCTTCCTTGTGCCCATGGATTTGCAGGATTGGGTCAGAGCAATGAGGAACGACTATGGTGCTGAAGATAAGCAGCTAGGAATGCTCACAGAGGTCGCAAGTATTTGCACTGTTATATCACCTGAGCAGAGACCAGCTATGTGGCAAGTCTTGAAGATGATACAGGAAATAAAGAAGAGTGTAACACTTGTAGGTAATATAGCTTCAGGATTTTCATAG 1920 0.4802 MPHSKTLFPLFFLCFSLIATVLSDQSSPASSKLLLSSDAASLLSFKSKADLDNKLLYSLHERFDYCQWQGVKCAHGGRVVRFYLQGSGLRGVFASYTLSRLDQLRVLCLRNNSLSGPIPDLSPLFNLKAILLDNNFFSGSLPPSFLLLHRLRTLSLSYNNLTGSIPVELVNLDRLVTLRLDSNRFDGTVPPLNQSSLLIFNVSGNNLTGPIPATVALARFHTASFSGNPGLCGDIISKACVHPRPRIFGSSPNASPLLGQSAESQGNIVVSSLTGKKHKSNGLILGSTIGASILIASFLGIIAVVRKRSISSNLESLKMAATEAMDAPPGKKTEEIDGADDHHNRDHLVFCCGEAQLYTLEQLMRGSAEFLGRGSIGTTYKAVVDGRFTLTVKRLDAGKTARTSDQEFKRHMEMVGQLRHLNLVPVRAYFQAEAERLVIYDYQSNGSLFNLIHGSRSARAKPLHWTSCLKIAEDIAHGIAYIHQTSRLIHGNLKSSNVLLGADFEACVTDYSLFLLADSSSSDDPDSAAYKAPETRNTNGPPTSKSDVYTFGVLLLELLTSKYPSQHPFLVPMDLQDWVRAMRNDYGAEDKQLGMLTEVASICTVISPEQRPAMWQVLKMIQEIKKSVTLVGNIASGFS 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g1341 639 Gene3D Phosphorylase Kinase; domain 1 347 442 - -
Lele55g1341 639 SUPERFAMILY L domain-like 38 233 - -
Lele55g1341 639 Gene3D Transferase(Phosphotransferase) domain 1 444 633 - -
Lele55g1341 639 SUPERFAMILY Protein kinase-like (PK-like) 369 626 IPR011009 -
Lele55g1341 639 Gene3D Ribonuclease Inhibitor 195 240 IPR032675 -
Lele55g1341 639 Pfam Leucine rich repeat 126 185 IPR001611 GO:0005515
Lele55g1341 639 Gene3D Ribonuclease Inhibitor 35 194 IPR032675 -
Lele55g1341 639 FunFam Nuclear pore complex protein NUP107 35 191 - -
Lele55g1341 639 Pfam Protein tyrosine and serine/threonine kinase 369 619 IPR001245 GO:0004672|GO:0006468
Lele55g1341 639 MobiDBLite consensus disorder prediction 520 543 - -
Lele55g1341 639 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 11 626 - -
Lele55g1341 639 ProSiteProfiles Protein kinase domain profile. 365 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g1341 Lele-ChrLele55 19841470 19844319 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g1341 22 630 Receptor kinase-like Gene Family AT3G50230 52.705 0.0 612
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele55g1341 PK_Tyr_Ser-Thr 7.6e-28 CL0016