Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g1333 ATGGAGCCAGCATCTGCGGATTCATCTTCTCAAACTACCTATTCAGCTCCAAATATTGAGCATCATTCTACGAATGTTTCTGGACAAAATGACAATGCCCATAACCCTGCGCCCTCATCGGCTACTGACAAATCATCCTCGGTGACGAATCTGAAATTTTCACAGTCCTTTGCAGCAAGACAAGGGAACTCCCAGACTGGAGATTCTGGGATGTCAAATTTTTCTTTCCTTACCAGTGGGCTTGGACGAAAGCTATCAATGCCTTGTGGTCGAAATGAGACTACTCCTGTCAATTCGGGAGCTGAGAAGCCTGATTTAATTGAATCATTCACCAAAGCATCATTATGTAATATCTTAGATGCATCATTAGCACCTTCGAGCATTTTTGTCTCAATTCATGTGCTCCAGTGCTTTACTGGTTTATTGGATGAAGAGTTCGATTTGGATCTGGCATACATTACCAAAAATATAATTGCTATTGGATTTCCAGCTGGTGATTCCAGCTCTGGAGAGAGCTCTGGAACAGGTTTCTATCGCAATCACATGGAAAAAGTGATTAGATTTCGCGAGACTCGTCATGAGGGAAAGTACAAAGTATACAATCTTTGCTCGGAGAGGTTGTATGATGCATCACTGTTCAAGGGGAAGGCTACAAGTTTCCCATTGGATGATCATAAGTGA 681 0.4229 MEPASADSSSQTTYSAPNIEHHSTNVSGQNDNAHNPAPSSATDKSSSVTNLKFSQSFAARQGNSQTGDSGMSNFSFLTSGLGRKLSMPCGRNETTPVNSGAEKPDLIESFTKASLCNILDASLAPSSIFVSIHVLQCFTGLLDEEFDLDLAYITKNIIAIGFPAGDSSSGESSGTGFYRNHMEKVIRFRETRHEGKYKVYNLCSERLYDASLFKGKATSFPLDDHK 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g1333 226 Gene3D Protein tyrosine phosphatase superfamily 139 226 IPR029021 -
Lele55g1333 226 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 143 225 - -
Lele55g1333 226 ProSiteProfiles Phosphatase tensin-type domain profile. 139 226 IPR029023 -
Lele55g1333 226 MobiDBLite consensus disorder prediction 1 47 - -
Lele55g1333 226 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 152 225 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g1333 Lele-ChrLele55 19809430 19812576 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g1333 40 225 Protein tyrosine phosphatase (PTP) family AT3G19420 48.148 3.06e-42 149