Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g1328 ATGGCATCACTCTGTGAAATCATGAGTCTTCTTTGGAGATTTTTCCCACTTGTTTTTCTTCTTCTTCTTGTTGCTGTAAATCCATGTTTTGGATTAAACAGAGATGGTGTTTTGTTGCTTTCTTTGAAGTACTCTGTTTCGAGTGATCCTCTGTTTGCGCTTGAAAGCTGGAATTACTTGGACGAAACTCCTTGTTCGTGGAATGGCGTTTCATGTCAAGCTGTTTCGGATGCAACGAATTCTTCTTCTTCTTCTCAGGATCGAGTAGTTGGTTTGTCTCTTCCGAATTCTCAGCTTCTGGGTTCCATTCCTGATGATCTTGGTTTGATTGAAAATCTTCAAAGTATTGACCTTTCTAATAATTCTCTCAATGGATCTCTTCCTTCTACACTTTTCCAGTCTTCAAAGCTTATATTTCTTGATTTGTCTGACAATTTGATCTCCGGGGAGATTCCGGATTCCATAGTACAGCTTAGTAATCTTCATGTTCTTAACCTCTCTGATAATGCATTGGCGGGAAAGCTTCCGACCAGTCTTGGAAAGATGCAGAATCTAACTTTTGTGTCGGTGAAGAATAATTACTTATCGGGTGGTCTTCCTAGTGGTTTTCGAACGATACAAGTTTTAGATCTATCTTCCAACTTATTGAATGGATCTCTTCCTTCGGATTTTGGTGGGGACAGTTTGCGATACTTGAACATCTCCTTCAACAAATTTTCCGAGAAAATCCCCGAAGAATTCGCCGGGAAAGTCCCCAGTAACGCTACTGTTGACCTCTCCTTCAACAATCTCACCGGAGAGATCCCACATACCTCTGTTTTCATGAACCACGATTCCGATTCATTTTCGGGGAATCCCGATCTTTGCGGAGAAGAAATCAATAATCCATGTCCCGTTTCATCGTCACCATCTCCTTCACCAAACAACACTTCTCCAACATCTCCTCCCGCATTCGCCGCATTTCCGAAAACACTCGATTCTCCGGCACCGGAATCTGGACACGGGAATGCTTCGCAGCAAGAAAAGACAGGGCTAAGAAGAGGAACAATCATAGGAATCGTCGTAGGCGACATCATAGGCATTGGATTATTAGCTATGATATTCCTATACGTGTACCAATCAAAAAGAAGGAAGAACATGGACGACGAACTAAACAAGGAACCTATCCATGGGTGGTCATCATCACCGTCGTCGTCGTATGAGTCAAAAGGGTTCAGAAGGTGGTCATGCCTGCGTAAAAAAACCGAAGAAGAAGAATCATCATCAGAATCCACAGGCTCTTCTGATAACGAAGTGGAAGCACAGAGACGAGAAGAATCATCGGAGAACAAAACAGGGACGTTGGTGACAGTTGACGGGGAAAAAGAGATGGAGCTGGAGACACTTCTAAAGGCGTCAGCTTTCATACTGGGTGCTACTGGTTCGAGCATAATGTACAAGGCGGTTCTCGAAGACGGCACCGTGTTAGCGGTTCGGAGAATCGGCGGGAGCGGCGTAGGCCGGTTCAAGGACTTGGAGAACCAAGTCCGAGTCGTGGCCAAACTGGTTCATCCGAACCTGGTTCGGATTCGGGGATTCTACTGGGGGAATCAAGAGAAGCTTATTATCTACAACTTCGTTCCCAATGGCAGCCTGGCCAACGTTCGCTACAGGAAAGTAGGTTCTTCGCCTTGCCATGTGCCATGGGAAGTAAGGCTGAAGATTGCTAGAGGGGTAGCACGTGGGCTGGCGTACCTCCACGACAGAAAGCATGTTCATGGAAATCTGAAGCCCAGCAACATTCTCTTGGGCAATGACATGGAGCCCAAGATTGGAGATTTTGGGCTTGAGAAAATTGTAACGGGAGATTCTAGTTATAAAGCTGGAGGGTCGGCCCGTATCTTCGGCAGCAAGAGATCCACCTCCTCACGGGATAGCTTTCAAGACGTTAACTTTGGGCCAATCCCAAGCCCAAGCCCGAGTGCCATAACAGGTGTCTCTCCTTACCATGCGCCAGAGTCGTTCAGAAACCTGAAGCCTCACCCGAAGTGGGACGTTTACTCGTTTGGGATCATATTTCTGGAGTTACTAACGGGGAAGATTGTGGTTGCCGATGAGATGGGCCAAGGCCCAGCAGGGCTGTTGGTGGAGGATAAGAACCGGGCCTTGAGGATGGCTGACGTGGCGATCCGTGCTGACATGGAGGGTAAAGAGGAGGCCTTGTTGGCTTACTTCAAAATAGGGTATAGTTGTGTGTCTAGTGTCCCACAGAAAAGGCCGTCAATGAAAGAAGTGTTGTATGCTCTTGATAAAAGCACATGCTCCTTTTCTCCTTCCTCCTCGTGCTCTTATTATTACGGTCACTAA 2346 0.4642 MASLCEIMSLLWRFFPLVFLLLLVAVNPCFGLNRDGVLLLSLKYSVSSDPLFALESWNYLDETPCSWNGVSCQAVSDATNSSSSSQDRVVGLSLPNSQLLGSIPDDLGLIENLQSIDLSNNSLNGSLPSTLFQSSKLIFLDLSDNLISGEIPDSIVQLSNLHVLNLSDNALAGKLPTSLGKMQNLTFVSVKNNYLSGGLPSGFRTIQVLDLSSNLLNGSLPSDFGGDSLRYLNISFNKFSEKIPEEFAGKVPSNATVDLSFNNLTGEIPHTSVFMNHDSDSFSGNPDLCGEEINNPCPVSSSPSPSPNNTSPTSPPAFAAFPKTLDSPAPESGHGNASQQEKTGLRRGTIIGIVVGDIIGIGLLAMIFLYVYQSKRRKNMDDELNKEPIHGWSSSPSSSYESKGFRRWSCLRKKTEEEESSSESTGSSDNEVEAQRREESSENKTGTLVTVDGEKEMELETLLKASAFILGATGSSIMYKAVLEDGTVLAVRRIGGSGVGRFKDLENQVRVVAKLVHPNLVRIRGFYWGNQEKLIIYNFVPNGSLANVRYRKVGSSPCHVPWEVRLKIARGVARGLAYLHDRKHVHGNLKPSNILLGNDMEPKIGDFGLEKIVTGDSSYKAGGSARIFGSKRSTSSRDSFQDVNFGPIPSPSPSAITGVSPYHAPESFRNLKPHPKWDVYSFGIIFLELLTGKIVVADEMGQGPAGLLVEDKNRALRMADVAIRADMEGKEEALLAYFKIGYSCVSSVPQKRPSMKEVLYALDKSTCSFSPSSSCSYYYGH 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g1328 781 MobiDBLite consensus disorder prediction 414 450 - -
Lele55g1328 781 Pfam Leucine Rich Repeat 112 132 IPR001611 GO:0005515
Lele55g1328 781 Gene3D Transferase(Phosphotransferase) domain 1 540 772 - -
Lele55g1328 781 Gene3D Ribonuclease Inhibitor 32 204 IPR032675 -
Lele55g1328 781 Gene3D Ribonuclease Inhibitor 205 299 IPR032675 -
Lele55g1328 781 SUPERFAMILY Protein kinase-like (PK-like) 469 762 IPR011009 -
Lele55g1328 781 MobiDBLite consensus disorder prediction 285 342 - -
Lele55g1328 781 Pfam Protein kinase domain 470 759 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele55g1328 781 Pfam Leucine rich repeat N-terminal domain 33 72 IPR013210 -
Lele55g1328 781 PRINTS Leucine-rich repeat signature 113 126 - -
Lele55g1328 781 PRINTS Leucine-rich repeat signature 158 171 - -
Lele55g1328 781 ProSiteProfiles Protein kinase domain profile. 464 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele55g1328 781 Gene3D Phosphorylase Kinase; domain 1 428 539 - -
Lele55g1328 781 FunFam Leucine-rich repeat receptor-like protein kinase 32 201 - -
Lele55g1328 781 MobiDBLite consensus disorder prediction 430 450 - -
Lele55g1328 781 SUPERFAMILY L domain-like 35 291 - -
Lele55g1328 781 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 92 764 - -
Lele55g1328 781 FunFam Leucine-rich repeat receptor-like protein kinase 205 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g1328 Lele-ChrLele55 19766195 19769359 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g1328 6 781 Receptor kinase-like Gene Family AT4G37250 57.975 0.0 831
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele55g1328 Pkinase 4.1e-29 CL0016