Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g1326 ATGTTTCCTTTCTTCTTCCTTCTTCATTTCTCCTCCGTGGCTTTAGCCTACACTGTTCCGGACAAGTATTTCATCAATTGTGGGTCCGATCACAGCGTAACCGACGGTGGTCAGCTTTTCGTCGGCGACTCTTCTGGTTCTGTCTGCTTTCCGAAGCAGAGCTACGTCGTGAAGGAACAGAATAAATCGTCAACCACACCTCTCCTGTATCAGACCGCTAGAAAGTGTCATGTCCCATCTGGTTACAAGTTCAAAATCGACGAAAATGAAGGCGGGTATTATCTGGTACGTCTCCATTTCTATGCTTTCTCGTCCACAGAAACTCTATCTGCGGCTCGATTCAACGTTTCGAGTGCGGGATTTTTGTTGCTGGATAATTTCAGCGTGGGAAATCAAACAAACTCTGCGATAATAAAGGAGTTTTATCTGAATATCGGTAGCAATATCAGGAACTTGCAAATCGATTTTTTCCCATCAAATTTCGCATTTGTAAACGCCATAGAACTGTTTAAAATCCCCGATAACTTCATCCCAAGTATGGCATCTCATATTACCAGCAAAGGAAATACCAGTGATTACAAGAACATTCTGATCTCCTCGGTGTTAGGTACGAGGTACATGCTTGATGTTGGTAATGGTGGCCCAGAGGTAAACGATATCTTGCGAAGAAGATGGGAAAAAGATAGTGGCTTTGACAAAGGAGAAGCTTTATCTCGTTCTGTTGCTATTAAGTTCGACAGAGAAGATGATAATGTTATGGAACAAGATAGTGGCTTTCTTGGTGTGGTTTCCACTAACGTTATAGCCCCAGAAACTGTTTACCAGACAGCAAGAGTGATGACTCAAGATTCCGGCGACCGTAGTAAATTATTTAACGTATCATGGTCACTTCCGGTGAAGAGGAACGCGAGCTATTTCATTCGAGCTCATTTCTGTGACATTACCAGTATCGGCCCTGGTCTTACGTACTTCAACTTTTATATCTACGACAACTTCAGTTGGTATCGTACAGATCCCTGGGATCCTTCTGTTCCTTTTTATCGTGATTTTGTTGTCGATTCCGATGATTCTGAAAAATTGAGGATCAGCGTTGGCCCTGATGAAGCTTCTACTGTTAAGAATGCTTTCTTGAATGGTCTTGAAGTGATGGAAATCATTAAAACTCGAGCTCAATACGCAGAGACCAAGTACCAATGTAATAAGAAGAATCGTCTTCTTCCTCTGGAGGTGGGGCTTGGAGCATTATTGGCACTGATTTGCATTATGGTCATTGGGCTCTGTTTGATTTGGAAATATGGGAAACCAAAGATTTTTAGAACTACTCTGGATTGGGCGCCCCTTTCAGTTAGAGGAGGAAGTTCACACGGCAAATATGGAAGCAGCCATGGTGGCGGTTCATCTCTTGGTAGCTTAAAACTAGGACTCAAGATCTCTTTCAACGAGATTCAATCTGCAACAAACAATTTCTCCAAAAAACGGATCATTGGGAAGGGTGGATTTGGGAATGTGTACAAGGGAATTCTCAAGAGCGGGGTGAAAGTGGCAGTGAAGAGAAGTGAACCAGGTTTATCTTCATCAGGACAAGGATTCTCAGAATTTCAGACAGAGATCATGGTCTTATCGAGAATTCGTCATCGGCATCTTGTTTCCTTAATCGGGTACTGCGACGAGAGATCAGAGATGATTCTGGTTTATGAGTACATGGAAAAAGGAACACTTAGAGATCACTTGTACAACTCAAATCTCCCAAGCTTGCCATGGAAACAGAGACTTGAAATCTGCATTGGAGCTGCAAGAGGTTTGAATTACCTTCATAAAGGAGCAGCTGGTGGAATCATTCATCGTGATGTGAAATCCACAAACATATTACTCGACGAAAACCATGTTGCTAAAGTTGCTGACTTTGGTCTCTCAAAAACAGGTCCTCTTGATCAACAACAACAATATTTCATCACAGGTGTTAAAGGCACTTTTGGGTATCTCGATCCCGAATATTTCAGAACCCAACAGTTAACAGAAAAATCCGATGTTTACTCATTTGGGGTTGTTCTTCTGGAAGTGTTATGTGCAAGACCAGCGCTTGATCCCGCACTTGCATGGAAACAAGTGAACTTAGCTGAATGGGGAATGTTCTGCAAGCAAAGAGGAACATTGGAACAGTTGATAGATCCAACGATAAAGCACCAAATAGATCAAAACTCGCTGAGAAAATTTACAGAGACAGTGGGAAAATGTCTGGAAGAAGATGGGGGTGAAAGGCCAACGATGAGTGATGTGTTGTGGGATTTGGAGTATTCATTGCAACTTCAGAGAGGTGCGAGACAGAGGGACTCATCATCTCAGGAGGATAATAATAATACTTCAAGTGCGGTTACAGCATCACTTGAATTTTCCAATGTAAGACGTCTTCCTTCATTGTCGACACAAGCAGATTCAGAAGTTATGTCGATTTTGAACGATGATAGTGCAGCTCATTCTGTTTTCTCGCTCTCAAATATAGCCAATGCTCCGCTCAGACAACGTGCTGTAGACTTTGTTCTGAATAAGATGACGGCTTCTGAAATCATCTCCGGAGTTGGCCTTCTTCTCTTTGACGAGAGCTCTGTTCAGAAACTTAGGTTTTGGAGGTGCTCTGCTCTCTGCAAGCCCTGGCCTTGTGACAAGAAGTGTGAGAAGTAG 2679 0.427 MFPFFFLLHFSSVALAYTVPDKYFINCGSDHSVTDGGQLFVGDSSGSVCFPKQSYVVKEQNKSSTTPLLYQTARKCHVPSGYKFKIDENEGGYYLVRLHFYAFSSTETLSAARFNVSSAGFLLLDNFSVGNQTNSAIIKEFYLNIGSNIRNLQIDFFPSNFAFVNAIELFKIPDNFIPSMASHITSKGNTSDYKNILISSVLGTRYMLDVGNGGPEVNDILRRRWEKDSGFDKGEALSRSVAIKFDREDDNVMEQDSGFLGVVSTNVIAPETVYQTARVMTQDSGDRSKLFNVSWSLPVKRNASYFIRAHFCDITSIGPGLTYFNFYIYDNFSWYRTDPWDPSVPFYRDFVVDSDDSEKLRISVGPDEASTVKNAFLNGLEVMEIIKTRAQYAETKYQCNKKNRLLPLEVGLGALLALICIMVIGLCLIWKYGKPKIFRTTLDWAPLSVRGGSSHGKYGSSHGGGSSLGSLKLGLKISFNEIQSATNNFSKKRIIGKGGFGNVYKGILKSGVKVAVKRSEPGLSSSGQGFSEFQTEIMVLSRIRHRHLVSLIGYCDERSEMILVYEYMEKGTLRDHLYNSNLPSLPWKQRLEICIGAARGLNYLHKGAAGGIIHRDVKSTNILLDENHVAKVADFGLSKTGPLDQQQQYFITGVKGTFGYLDPEYFRTQQLTEKSDVYSFGVVLLEVLCARPALDPALAWKQVNLAEWGMFCKQRGTLEQLIDPTIKHQIDQNSLRKFTETVGKCLEEDGGERPTMSDVLWDLEYSLQLQRGARQRDSSSQEDNNNTSSAVTASLEFSNVRRLPSLSTQADSEVMSILNDDSAAHSVFSLSNIANAPLRQRAVDFVLNKMTASEIISGVGLLLFDESSVQKLRFWRCSALCKPWPCDKKCEK 892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g1326 892 ProSitePatterns Protein kinases ATP-binding region signature. 495 517 IPR017441 GO:0005524
Lele55g1326 892 Gene3D Phosphorylase Kinase; domain 1 466 567 - -
Lele55g1326 892 SMART serkin_6 489 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele55g1326 892 Gene3D Transferase(Phosphotransferase) domain 1 568 792 - -
Lele55g1326 892 CDD STKc_IRAK 495 764 - -
Lele55g1326 892 Gene3D - 204 386 - -
Lele55g1326 892 Gene3D - 22 173 - -
Lele55g1326 892 Pfam Protein tyrosine and serine/threonine kinase 491 760 IPR001245 GO:0004672|GO:0006468
Lele55g1326 892 ProSitePatterns Serine/Threonine protein kinases active-site signature. 612 624 IPR008271 GO:0004672|GO:0006468
Lele55g1326 892 FunFam receptor-like protein kinase FERONIA 456 567 - -
Lele55g1326 892 SUPERFAMILY Protein kinase-like (PK-like) 471 764 IPR011009 -
Lele55g1326 892 ProSiteProfiles Protein kinase domain profile. 489 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele55g1326 892 PANTHER OS07G0166700 PROTEIN 476 770 IPR045272 GO:0004714|GO:0006468
Lele55g1326 892 Pfam Malectin-like domain 25 384 IPR024788 -
Lele55g1326 892 FunFam Receptor-like protein kinase FERONIA 568 786 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g1326 Lele-ChrLele55 19714883 19719297 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g1326 16 836 Receptor kinase-like Gene Family AT2G23200 45.731 0.0 601
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lele55g1326 Malectin_like 1.7e-23 CL0202
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g0159 53 1291647 1296212 Lele55g1326 55 19714883 19719297 hybridization
Lele54g0161 54 1363683 1366241 Lele55g1326 55 19714883 19719297 hybridization