Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g1313 ATGACTAAGCCAAACGACCCAGAATTTCCATGCTTGGCCAAACTCATCCAAAAGGGCCTCAGAAATAAGGGTTGGCTTCTTAATTACCAGAACATTTACATCCCATATTATGCAGCTCATATCATTGGCTCTGACACCATGAACAAATCTAAGTTTGATGAAAAAGCAGTTAAGTCCAACGTTGTAACGCTATTAATCGAACTCTTACGAGGTAAGATCAGTTGGGTTGAACGGAGAGTTTCACTTCGAGCATTGGATCACTTGGCAAGACATGAATCAACCTTTGAAGCTGTAGCAGAACACGAGGAAGAAATCATACAACTAGCCATTCACATAGCTTCCACGATCTGTGGGCAATTGGGGTGGATTAGCGAACCCAAAATCTCTTATGGAATTGGACTTCTTGGAACTCTGTGTCATACAAAACTAGGAAGAGAAAGTATAGCAGAAGTCGAGGATGACGTAGAGAATCTTTGTAATGTCTCAAGATCTTCAGATGATCGACAACACTTGGCTATTGATAGTCTTCTGCAACTTCTCAAAGGCCCAATCACAAGGTATAAAGTAATTGAAACTGTAGCTCCAGTTCTTGCTGATCTAGTTGAACTCAGAGGAGTTCAAATGATGGAGCGAGTTCTGTTACAAGATTATCATAAAATCAAGTTCTTTGAAATGAAACTGAAGAGTGAGAAAGCAGAGAAAGCCTTAAGAGAAATATGGGATATGAAGGTATGTTAA 738 0.3984 MTKPNDPEFPCLAKLIQKGLRNKGWLLNYQNIYIPYYAAHIIGSDTMNKSKFDEKAVKSNVVTLLIELLRGKISWVERRVSLRALDHLARHESTFEAVAEHEEEIIQLAIHIASTICGQLGWISEPKISYGIGLLGTLCHTKLGRESIAEVEDDVENLCNVSRSSDDRQHLAIDSLLQLLKGPITRYKVIETVAPVLADLVELRGVQMMERVLLQDYHKIKFFEMKLKSEKAEKALREIWDMKVC 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g1313 245 SUPERFAMILY ARM repeat 26 180 IPR016024 -
Lele55g1313 245 Gene3D - 25 237 IPR011989 -
Lele55g1313 245 PANTHER ARM-REPEAT/TETRATRICOPEPTIDE REPEAT (TPR)-LIKE PROTEIN 1 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g1313 Lele-ChrLele55 19585144 19586200 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele55g1313 55 19585144 19586200 Lele49g0325 49 1921308 1924029 CCT
Lele55g1313 55 19585144 19586200 Lele51g0338 51 1936339 1939062 CCT
Lele53g0170 53 1411892 1416402 Lele55g1313 55 19585144 19586200 hybridization
Lele54g0171 54 1462802 1464861 Lele55g1313 55 19585144 19586200 hybridization