Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g1302 ATGGAGAAGAGTATTAAGCCCAGCGACAAGGAATTCATGAGAATGGCCATGTTAAAACATGAAGAGACTTTTAGAGAGCAGGTATATGAACTCCATCGTTTGTACCGGATCCAGAAGATCCTGATGAAGAATATGGAAAATGGAAGAGCTATTGAAGTATCCCAAGGAGAATGGAACTTGAAGAATGCGATTAGTTTAACTCGAACCACTAATCATCATAAAGATGCACAGAAAAAGCCTGAAATCAAATTTGATCTTGAACGGCCAGCGGAGGAGCACATTGCAGAATCAGACGTGGATGAGGTAGAGATCATAGATGAGTCTGAGATTGAGCTGACACTAGGACCCTCAAGTTATTACAACCGTAGAAAGAAAGTTGATACACCACTAACTTCAGATTCTGGACATAGCTTGTCTTCTTCTTCCACTGGATCCAGCCACATAAACAAGACAGCAAGAGAAGACTCAAGTGGAATAAGAAACAGTTTTGTTGATATTGAAGAACGATCAAGACAAGAGAGGCTAAAACAGCCACCTTGGCTTTTTCAAATGTTGAGTCTGAACATGACTTGA 573 0.4049 MEKSIKPSDKEFMRMAMLKHEETFREQVYELHRLYRIQKILMKNMENGRAIEVSQGEWNLKNAISLTRTTNHHKDAQKKPEIKFDLERPAEEHIAESDVDEVEIIDESEIELTLGPSSYYNRRKKVDTPLTSDSGHSLSSSSTGSSHINKTAREDSSGIRNSFVDIEERSRQERLKQPPWLFQMLSLNMT 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g1302 190 MobiDBLite consensus disorder prediction 131 158 - -
Lele55g1302 190 MobiDBLite consensus disorder prediction 125 164 - -
Lele55g1302 190 PANTHER TRANSCRIPTION FACTOR, PUTATIVE (DUF863)-RELATED 7 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g1302 Lele-ChrLele55 19477412 19478068 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0341 49 2000892 2001623 Lele55g1302 55 19477412 19478068 CCT
Lele55g1302 55 19477412 19478068 Lele49g0337 49 1983071 1984309 CCT
Lele55g1302 55 19477412 19478068 Lele50g0356 50 2039847 2042098 CCT
Lele55g1302 55 19477412 19478068 Lele52g0362 52 2120908 2125134 CCT
Lele53g0183 53 1524638 1525294 Lele55g1302 55 19477412 19478068 hybridization
Lele54g0186 54 1584662 1585318 Lele55g1302 55 19477412 19478068 hybridization