Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g1297 ATGGCTAGATCCTCACAGTTAGATAAGCATACTTTAGTGAAACAACTGCGTACTACGTTTGGAGAAGTTGTAGCTGCAACTGGTGATGGAGCAAATGACGCTCCTGCCCTTCACGAGGCAGACATTGGACTTGCAATGGGCATTGCTGGAACTGAGGTTGCTAAAGAAAGCGCTGTTGTCATAATTCTGGATGATAATATCTCTACTATAGTGACAGTGGCAAAATGGGGACGTTCATTCGGCTTGCACATCGGTGCGCCTCTTGCACTAGCAACTGAACCTCCAAATGATGATGAACTAAGGAAGCGTTCCCGGTGGGAAGGGAGGGAAGTTTCATCAGCAATGTTACGTGGAGGAGTATCTTAG 366 0.4672 MARSSQLDKHTLVKQLRTTFGEVVAATGDGANDAPALHEADIGLAMGIAGTEVAKESAVVIILDDNISTIVTVAKWGRSFGLHIGAPLALATEPPNDDELRKRSRWEGREVSSAMLRGGVS 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g1297 121 Gene3D - 1 72 IPR023214 -
Lele55g1297 121 PRINTS H+-transporting ATPase (proton pump) signature 27 43 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele55g1297 121 PRINTS H+-transporting ATPase (proton pump) signature 59 84 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele55g1297 121 PANTHER CATION TRANSPORTING ATPASE 1 80 - -
Lele55g1297 121 MobiDBLite consensus disorder prediction 91 121 - -
Lele55g1297 121 Pfam haloacid dehalogenase-like hydrolase 21 61 - -
Lele55g1297 121 MobiDBLite consensus disorder prediction 95 110 - -
Lele55g1297 121 PRINTS P-type cation-transporting ATPase superfamily signature 51 63 - -
Lele55g1297 121 PRINTS P-type cation-transporting ATPase superfamily signature 27 46 - -
Lele55g1297 121 SUPERFAMILY HAD-like 2 81 IPR036412 -
Lele55g1297 121 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 1 79 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g1297 Lele-ChrLele55 19433854 19434946 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g1297 1 117 Primary Pumps ATPases AT4G37640 57.055 1.65e-43 149