Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g1294 ATGAATCTTCATATCTTTATCTTCTTTTATCTCATTTCATTGTCTCTATGCCACACGATCAAGGGGACCAAATCCATCATCAACTTCAGAACTTTCAATGAATCTCAACCAAGAAGAATTCTTCACCAACCGCTGTTCCCAGACGGTTCTGCGCCACCACCAGCCGCCATTGAGTCTCCACCGCCGCCTCCGCCGGACACTCCGCCTTCTCCCGATATTCCTTTCTTTCACGAGAATCCTGTAGGACCAACGCCGGATCAGAATCAGCCACCACCGGCGATTCCCAATGGCGTCACAACAGTTCCGAACCCGACGTTAGCAACAACAACAACAACAACAACGGCGAGCAAGCCGACGAAGAAGGTCGCAATCGCCATATCAGTTGGAATTGTGACGCTTGGTATGCTCTCTGCTCTTGGCTTCTTCTTGTACAGACACCGTGGGAAGCATCCCAGTGAGACCCAGAAGCTCGTGAATGGGAATTCTCAGGGGATTAACGAGGATTCTTCGGGGGGCCCACCGTCGAGTTTTCTGTACATTGGTACGGTGGAGCCGACACGAGCTGAATCAGTGAGTGAGCCGGTTGAATCTAATGGAGAAAACAAGTCGCCCTATCATAAACTGAATCCTCCAAAGCCATCCGATCGGTACCGGCCAAGTCCTGAATTGCAGCCATTGCCACCGCTAACAAAGCCACCAGATGGGAATTACCCGCCGGCGAGTTCTTCTTCTTCTGCGTCGTCGTCGGCGTCCGACAAGGAAAGCAACGACATGGCATTTCATACGCCACAAGGGTCATCGCTGAGCTACGAGGATGGCTATTACACACCAATTTCGCGCCAGAGTTCTCTGGCTAACGGTAGCCCAACTGTAACTGCGAGGAGTGAGACTAATTCCACTAATTCTCATCCTTTTTCGAAGAGGACATCGCCAAAATCTCGGTTCACTGCTTCTTCGCCGGATGTGAGGCCTGTTATTATGCCATCTATAAAGCGGGCTCCGCCTCCGCCTCCGCCTCCTCCGCCGGCGGCGGCAACTGGATCAACACCATTTCAGCATGTAGACAAACAAGTGACCTCCGGTGCTTCTAGAAGGCCAAAATTCTCAGCGCCACCTCCGGCACCGAATTTGACGCATCTCCAGTCAACAACAGACTACGCACCCCAGGACACGTCGAGGACTTCATCTAAATATCCTCCTCCACCGCCTCCACCTCCGCCTCCACCGCCACCACTGCAAACAACACCGAGGAAAACAGTGTCTCCAGCAATTAGTGTTCCCTCATCTTCCGCATCAAGAAAGCAACAGTCTTGGTCTGTAATTGAAGGAACAGCTTCTGTTAAAAGTATAGCAAAAGCCTCAGACGACTCTGAACATGTTGATGAAAGGGTCGCCTCTTCCCAGAGCATGGAAGCCGATGACATGGACGGAGGAAAACCCAGGTTAAAGGCTCTGCATTGGGATAAAGTGCGGGCAACCTCTGATCGTGCTACAGTGTGGGACCAGATAAAATCAAGCTCTTTTCAATTAAATGAGGACATGATGGAGAGCCTGTTTGGGTGCGACAATTCTACAAAGGTGGTTCCAAAAGAAACTCATAGAAAACTGGTTCTTCCTCCTGTGGTTAATCAGGAGGAGAAGGTGCTGGATCCGAAGAAGTCACAGAACATAGCTATACTACTAAGGGCGCTGAATGTTACAAGAGATGAAGTCTGCGGAGCTCTTTTGGACGGGAATCCTGAAGGTTTGGGTACTGAGCTATTTGAAACTCTAGTAAAGCTGGCTCCCACTAAGGAGGAAGAGATAAAGCTTAAGAAGTATGATGGTGACCTCTCAAAACTTGGCACTGCAGAAAGATTTCTTAAAGCAGTTCTTGATATCCCTTTTGCCTTCAAAAGAGTTGAAGCCTTGCTCTACAGAGCTAACTTTGATAATGAAGTCAATTACTTGAGGAAGTCTTTTCAAACCCTCGAGGCAGCGAGTGAGGAATTGAAGGACAGCCGGCTGTTCCTCAAACTCCTCGAAGCTGTTCTTAGGACAGGAAACAGAATGAATGTTGGCACCAATCGTGGTGATGCTAAAGCTTTTAAACTGGACACACTGCTTAAACTGGTAGACATAAAGGGAACCGATGGTAAGACTACATTGCTTCACTTTGTGGTGCAAGAGATCATTAGATCCGAAGGCGCGGGCGGTGATTCTGCGAATGAGAATGTTCAGAAGAAAATGAATTCCAACTTCAATGAGGATGAGTTCAAGAAGCAAGGATTGCAGGTTGTGGCAGGACTAGGTAGAGACCTAAGCAATGTGAAGAAAGCAGCAACAATGGACTCTGATGTCTTGAGCAGCTATGTCACGAAGCTCGAAATGGGGCTCGAGAAAGTGAGATCCGTTCTGCAATATGAAAGATCAGATACGAAAGGGGATTTATTCAACTCCATGAAGCTATTTGTAAGAGATGCTGAAGAGGAAATTGTTAGGATCAAGGAAGATGAAAGAAAGGCTTTGTTCCTTGTGAAGGAAGTAACAGAATACTTTCATGGGGATACAGCAAAAGAAGAAGCCCACCCTTTCAGGATCTTCATGATTGTAAGAGACTTTCTAAATATTTTGGATCAAGTGTGCAAAGAAGTGGGAAGAATGCAGGATAGAATTATGGTTGGAGCTGCAAGATCTTTCAGAATAGCTTCAACTGCATCACTAGTTCGCAACAAGTACCATGCAGGACAAGATAGAAGTTCAGATGAAGAAAATTCATCCCCATAA 2766 0.4743 MNLHIFIFFYLISLSLCHTIKGTKSIINFRTFNESQPRRILHQPLFPDGSAPPPAAIESPPPPPPDTPPSPDIPFFHENPVGPTPDQNQPPPAIPNGVTTVPNPTLATTTTTTTASKPTKKVAIAISVGIVTLGMLSALGFFLYRHRGKHPSETQKLVNGNSQGINEDSSGGPPSSFLYIGTVEPTRAESVSEPVESNGENKSPYHKLNPPKPSDRYRPSPELQPLPPLTKPPDGNYPPASSSSSASSSASDKESNDMAFHTPQGSSLSYEDGYYTPISRQSSLANGSPTVTARSETNSTNSHPFSKRTSPKSRFTASSPDVRPVIMPSIKRAPPPPPPPPPAAATGSTPFQHVDKQVTSGASRRPKFSAPPPAPNLTHLQSTTDYAPQDTSRTSSKYPPPPPPPPPPPPPLQTTPRKTVSPAISVPSSSASRKQQSWSVIEGTASVKSIAKASDDSEHVDERVASSQSMEADDMDGGKPRLKALHWDKVRATSDRATVWDQIKSSSFQLNEDMMESLFGCDNSTKVVPKETHRKLVLPPVVNQEEKVLDPKKSQNIAILLRALNVTRDEVCGALLDGNPEGLGTELFETLVKLAPTKEEEIKLKKYDGDLSKLGTAERFLKAVLDIPFAFKRVEALLYRANFDNEVNYLRKSFQTLEAASEELKDSRLFLKLLEAVLRTGNRMNVGTNRGDAKAFKLDTLLKLVDIKGTDGKTTLLHFVVQEIIRSEGAGGDSANENVQKKMNSNFNEDEFKKQGLQVVAGLGRDLSNVKKAATMDSDVLSSYVTKLEMGLEKVRSVLQYERSDTKGDLFNSMKLFVRDAEEEIVRIKEDERKALFLVKEVTEYFHGDTAKEEAHPFRIFMIVRDFLNILDQVCKEVGRMQDRIMVGAARSFRIASTASLVRNKYHAGQDRSSDEENSSP 921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g1294 921 MobiDBLite consensus disorder prediction 154 176 - -
Lele55g1294 921 MobiDBLite consensus disorder prediction 350 364 - -
Lele55g1294 921 PANTHER FORMIN-RELATED 8 903 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Lele55g1294 921 MobiDBLite consensus disorder prediction 395 416 - -
Lele55g1294 921 SMART it6_source 472 886 IPR015425 -
Lele55g1294 921 MobiDBLite consensus disorder prediction 375 394 - -
Lele55g1294 921 MobiDBLite consensus disorder prediction 99 117 - -
Lele55g1294 921 MobiDBLite consensus disorder prediction 329 346 - -
Lele55g1294 921 Pfam Formin Homology 2 Domain 478 871 IPR015425 -
Lele55g1294 921 MobiDBLite consensus disorder prediction 236 317 - -
Lele55g1294 921 MobiDBLite consensus disorder prediction 417 444 - -
Lele55g1294 921 MobiDBLite consensus disorder prediction 214 235 - -
Lele55g1294 921 SUPERFAMILY Formin homology 2 domain (FH2 domain) 401 884 - -
Lele55g1294 921 MobiDBLite consensus disorder prediction 452 480 - -
Lele55g1294 921 MobiDBLite consensus disorder prediction 152 480 - -
Lele55g1294 921 ProSiteProfiles Formin homology-2 (FH2) domain profile. 472 897 IPR015425 -
Lele55g1294 921 Gene3D Formin, FH2 domain 468 883 IPR042201 -
Lele55g1294 921 MobiDBLite consensus disorder prediction 42 117 - -
Lele55g1294 921 MobiDBLite consensus disorder prediction 47 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g1294 Lele-ChrLele55 19418170 19421265 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g1294 38 911 FH2 protein (formin) Gene Family AT5G67470 56.986 0.0 827