Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g1287 ATGAGCACCATTCTACCTCTCCGCCCACGTTGTTGTTGTGGATTGCTACTGAACGGCGAATGTAGACCTTCGGCGACGTCTCCGCCTTCTACGGCTGAGTCGTTAGGGTTTATGAAACTTTTTGGAATCAATGTGATTGGATTAGATCACAGTCGTAGAAGTTTGAGCCTGTATGGTAACAGCGTGAGGTCAAGCTTTCTCAAGCCGATTAAAGCGGAGGATGACTCTGGCGCGTCTTTGGTTGATGATTGTGCTGAATATTCTGGTAATAATCGTCACCAGATGTCAAATGTAGGGAAATCGACAAACATTTTGTGGCATAAAACTCCAGTTCAGAAACTTGATAGGCAAAGGCTACTTCAGCAAAAAGGCTGTGTCATTTGGTTAACTGGTCTTAGTGGATCAGGGAAAAGCACTCTAGCATGTGCTTTGAGTCTGAATTTGCACTCCAGAGGAAAACTGACTTACATCCTTGATGGTGATAATGTTCGGCATGGTCTAAACAAAGATCTTAGTTTTAGAGCTGAAGATCGTTCAGAAAACATACGAAGGATTGGTGAGGTAGCAAAACTCTTTGCAGATGCTGGTGTTATTTGCATTACCAGTTTAATATCTCCTTACCGAAAGGATAGGGATGCTTGCAGAGCACTACTTTCGAAGGGAGATTTTATTGAGGTTTTCTTAGATGTGCCACTACACTTATGTGAATCAAGGGACCCGAAGGGACTCTATAAACTTGCCCGAGCTGGAAAGATAGAAGGTTTCACAGGGATAGACGATTCTTATGAACCACCATCTTGTTGTGAGATAGTGTTACAACAGAAAGGAACCGACTGTGCTTCTCCGAGTGACATGGCAGAAACAGTGGCAGCGTACTTGGAGGAGAAAGGGTACCTGCGGGCCTAA 906 0.4415 MSTILPLRPRCCCGLLLNGECRPSATSPPSTAESLGFMKLFGINVIGLDHSRRSLSLYGNSVRSSFLKPIKAEDDSGASLVDDCAEYSGNNRHQMSNVGKSTNILWHKTPVQKLDRQRLLQQKGCVIWLTGLSGSGKSTLACALSLNLHSRGKLTYILDGDNVRHGLNKDLSFRAEDRSENIRRIGEVAKLFADAGVICITSLISPYRKDRDACRALLSKGDFIEVFLDVPLHLCESRDPKGLYKLARAGKIEGFTGIDDSYEPPSCCEIVLQQKGTDCASPSDMAETVAAYLEEKGYLRA 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g1287 301 CDD APSK 126 272 IPR002891 GO:0000103|GO:0004020|GO:0005524
Lele55g1287 301 PANTHER BIFUNCTIONAL 3'-PHOSPHOADENOSINE 5'-PHOSPHOSULFATE SYNTHASE 101 285 - -
Lele55g1287 301 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 122 296 IPR027417 -
Lele55g1287 301 FunFam Adenylyl-sulfate kinase 95 301 - -
Lele55g1287 301 Pfam Adenylylsulphate kinase 123 276 - -
Lele55g1287 301 Gene3D - 93 301 IPR027417 -
Lele55g1287 301 TIGRFAM apsK: adenylyl-sulfate kinase 106 278 IPR002891 GO:0000103|GO:0004020|GO:0005524
Lele55g1287 301 Hamap Adenylyl-sulfate kinase [cysC]. 122 297 IPR002891 GO:0000103|GO:0004020|GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g1287 Lele-ChrLele55 19342249 19345488 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele55g1287 55 19342249 19345488 Lele49g0349 49 2061074 2063968 CCT
Lele55g1287 55 19342249 19345488 Lele50g0372 50 2121020 2122675 CCT
Lele55g1287 55 19342249 19345488 Lele51g0362 51 2079677 2081713 CCT
Lele55g1287 55 19342249 19345488 Lele52g0374 52 2203841 2205497 CCT
Lele53g0198 53 1658840 1662078 Lele55g1287 55 19342249 19345488 hybridization
Lele54g0202 54 1741008 1744207 Lele55g1287 55 19342249 19345488 hybridization