Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g1279 ATGAACTCCAATCCCGGTCATTACGTTGCTCTCGTTGTTACTTCGCCCGCTCTTATGTTCGAGAATGGCGCGACATTGAAGCAGCTCAAACTTCTTCGACCCGACGATACTCTGCTCATGGGCCAGGTTTATCGCTTGATCAGCTTTGAAGATGTATTGAAGGAGCTATCTGCGAAAAAATGCGTTAAACTAGGCAAATTGCTGAAGGACAGAGGCAGTCTTGGCGTTCACATCAAGCACAGAGACTCCAGAGCTCCAAATCCGAGTTCGAGACTCGATTTCGCTCCCATGAAGGTGGAACAGGAGATTCACCGAATGGGAAGTAATGGCGGCGGGAGCAGCAGCAGTCACAAAGTTGTGAGAAGACAATATGGTGGTGGTGGGGGGCAATGGAGACCAGCCTTACAGAGCATTGCAGAAATTGGAACTTGA 432 0.4931 MNSNPGHYVALVVTSPALMFENGATLKQLKLLRPDDTLLMGQVYRLISFEDVLKELSAKKCVKLGKLLKDRGSLGVHIKHRDSRAPNPSSRLDFAPMKVEQEIHRMGSNGGGSSSSHKVVRRQYGGGGGQWRPALQSIAEIGT 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g1279 143 PANTHER EXPRESSED PROTEIN 1 140 - -
Lele55g1279 143 Pfam PADRE domain 1 140 IPR025322 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g1279 Lele-ChrLele55 19282303 19284784 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele55g1279 55 19282303 19284784 Lele49g0362 49 2135313 2138172 CCT
Lele55g1279 55 19282303 19284784 Lele50g0394 50 2207710 2210820 CCT
Lele55g1279 55 19282303 19284784 Lele51g0376 51 2162644 2165519 CCT
Lele55g1279 55 19282303 19284784 Lele52g0391 52 2294682 2297782 CCT
Lele53g0208 53 1715498 1716013 Lele55g1279 55 19282303 19284784 hybridization
Lele54g0212 54 1793755 1795717 Lele55g1279 55 19282303 19284784 hybridization