Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g1246 ATGGAACTTCTCCCAATCACACATTTTCTCATTTTGCTGTTTTCTCTATTGTGCTTCTGTCATTTCTCATTGCAGGCTTCTTTTACGGGGGATTCTGAGATTCTTCTCCGGGTTAAGACTACTCAGATCGTTGATGAGAACGGTAGCCTCAAAAATTGGGACAGAGGCGTCACTCCCTGCAACTGGATTGGCATTACCTGTGATGAACTTAATCGCTCCGTTGTCGCTATTGACCTGTCTGGGACTGGCATTTATGGTGGATTTCCGTTCGGTTTTTGTCGCATTCGGACCCTGCTAAGGCTTTCTGTTGCGCAAAATTATCTCGGTGGTGTTGTGTCTCCTCAATCACTCCTTCTCTGTTCCCACCTTCGTGTCTTGGACATCTCTGATAACTTATTTGTCGGCGAGTTGCCGCAATTCTCGTCAGAGTTCTCTCAACTTAGACGGCTTGATTTCTCGCTTAACAACTTTACTGGTGATTTTCCGGCAAGTTTTGGCCGGTTTCCCCATCTCAGGGTGCTCAGTTTGTCTTCGAACTTGCTAAACGGCACCATTCCCGCGTTCTTAGGCAATCTCAGTGAGTTAACTCGATTGGAACTCGCTTATAATCCGTTCAGGCCAGGACCTTTACCCTCCCAACTTGGAAATTTATCGAACCTCGAAGTTATGTTCCTTGCCGATTCAAATGTCGAAGGGAGTATACCGGACTCGATAGGGAAACTGGTCTCGCTCAAGAACTTGGATTTGTCAAAAAATTTGCTGTCAGGTAAAATTCCAGATAGCATTTCGGGTTTGACAAGTGTAGAACAAATTTTGCTATTTATGAACCAACTTTCAGGTGAAATTCCTCAAGGTTTGGGAAACCTAAGCAGTTTGATTAGTTTAGACCTCTCTCAAAATAATCTCACAGGGAAATTGCCGGATTCAGTTGCTGCCTTGCGTCTCCATTCTCTGCAATTGAACGACAATTTCCTCGAAGGAGAAATCCCTGTGAAAGTAGCTGCAAATCCAAATTTAGTGAGACTAAAGCTCTTTAATAATAGCTTTACTGGGAAACTACCCGAAGATCTAGGTCGAAACTCCGATTTACAGGAGCTTGATATTTCCACCAATGACTTCGTTGGCGAATTGCCTAAGTACGTCTGTGAAAGGAACAAGTTGCAGCGTCTTGTCACATTTAGGAATCGCTTTTCCGGAACTCTCCCGGATCAGTATGGTGACTGTCATTCACTTGATTATGTCAGAATCGAGTTCAACCAACTTTCTGGTGAGGTGCCTCCAGAATTCTGGAAACTTCCTGGCCTTGAAATTTTAAAAATGAATAACAACTTGTTGGAAGGTTCAGTCTCGATCTCCAGCGCTCAGAGACTCTCCTTACTTCGTATAGCTGATAACAGGTTTTCTGGACATTTCTCTGCAGAAATTTGTGAACTCCACGATATTAGAGAGATTGACATTAGTCGGAACCAGTTTACCGGTGAAGTTCCGTCATGTATAACTGGATTGAAGAAGTTACAGAAGCTGAGCATGCAGGAGAACATGTTCACCGGCGCGATTCCTCGTAACGTTAATTCCTGGACTGACTTGACCCTGTTGAACTTGTCGTATAACAGATTCTCCGGTACAATTCCTCCAGAGCTTGGTAATTTGCCCGGTTTGAGTTCTCTTGATCTTGCCATGAATGTCCTGACTGGGGGAATCCCGCCGGAGTTAGCAAAGCTCAAGCTCAGCCAGTTCAACTTGTCGGGAAACAAATTGTCTGGAAATGTACCTTCAGGGTTCAACAATGAATTCTATTTGTCGGGTCTCGTCGGTAATCCGAACCTCTGCAGCGAAGTCATGAAATTCCTTCAACCTTGTTCCAAATCCAAACACTTCTCTTCGATAGTTATTATTGTGTTATCTACCTTCGCTGTACTCCTTCTGGGGTTTCTCCTCTTGTTCCTTAAGAGCAAAAAGTCATTATTTTTAACTGACAAATCCAAGCGCTCTTTTAGGACAACTGCATTCCATATGGTGGGGTTTAACGAAGAAGATGTTGCTCCATTGCTAACCAGTGAGAATCTCATTGGCACAGGGAGTTCTGGCCAGGTCTATAGGGTGAAGCTCAAGACAGGAGAGACAGTTGCTGTGAAAAAGCTATGGGAAGGACGTGCAGGAAAACTGAATAGTACAGATTCGGTTTTCAAAACGGAGATTGAGACACTGGGTAGAATTCGGCATGTTGATATAGTAAAATTGTTATATAGTTGCAGTGCTGACGATTTCCAGATTCTGGTGTACGAGTATTTGGAGAACGGCAGCTTGAGTGACGTTTTGCACGGTGAAAAGTGCAGTGAGTTGATGGATTGGTCGAGGCGGTTCAACATAGCAGTAGGTGCAGCTCGTGGACTGGCTTATTTACACCATGACTGTGTGCCGCCTATAGTTCACAGAGACGTCAAGAGCAGTAACATATTGCTGGATCGTGATTTCAGACCTCGTCTTGCAGACTTTGGATTGGCTAAAACCTTGCAGCCAAAGGCAAAAGAAGATGGTCGTAGGGCTACATCCAGGATCGCTGGGTCCTATGGTTACATTGCTCCAGAATATGCTTACACACTGAAAGTAACTGAGAAAAGTGATTGTTATAGCTATGGTGTAGTACTGATGGAATTGATCACAGGCAAGAGGCCAAATGATCCATCCTTTGGTGAGAACAGGGATATAGTGAAGTGGCTAACTGAGACTGCTTTATCAAGTTCTACAGGAGGAGGGAGTGGCGATATAGAAGGTCATCGCAGTTTCCTGGTTAAGATTGTAGACCCTAGATTGAACCCCTCCACTTGTGATTATGAAGAGATTGGTAAGGTTTTGAGAGTGGCTCTGCTTTGCACCTCAACATTCCCCATTAATAGACCCACAATGAGAAGGGTGGTCGACTTGCTTAGGGGACATAAGACCCGACAGCTGCAAGAAGATTTGGAGAGAAGTTTCCTGGGAAAGAATGAGAGAATATCCAATTCTGTGGGATGTCAGCGAAGGGACGAGAATGGGACTAGAAAATTTTATTCATTTGACTTTCAATATAGTGAAAGCAAAGCTGCAGTTGTGGGGTTTATGATGATGATCGCAGTGAAGTTTGAGTCATATTTTCACCTCATCAGGTTAAAACTTACACCGTTTGGTTCACTGAAAATTAGTCCTGAGAAATGGAAATGGAAAGGAAAACTTATTTCTCATAGTTTGGTTCGCTGGAATTGGACTCCTGAGAAATCGATTTCCTTCAAAATTCTGGAAAATCATTTCTGTAGCTGGAGCTATGAAAATCCTTCTATGCTTTCTTCAGCTCTATCGCCCCGTCGATATCTCACTGTCCCTTCTTTGCAGTTCGCCTTAGTTTCTTCGTATTCTTACCTTAAACAGCGAAGTGATATCTCACCTTTTCGATTATGGAAGATGTTTATTTGA 3450 0.4354 MELLPITHFLILLFSLLCFCHFSLQASFTGDSEILLRVKTTQIVDENGSLKNWDRGVTPCNWIGITCDELNRSVVAIDLSGTGIYGGFPFGFCRIRTLLRLSVAQNYLGGVVSPQSLLLCSHLRVLDISDNLFVGELPQFSSEFSQLRRLDFSLNNFTGDFPASFGRFPHLRVLSLSSNLLNGTIPAFLGNLSELTRLELAYNPFRPGPLPSQLGNLSNLEVMFLADSNVEGSIPDSIGKLVSLKNLDLSKNLLSGKIPDSISGLTSVEQILLFMNQLSGEIPQGLGNLSSLISLDLSQNNLTGKLPDSVAALRLHSLQLNDNFLEGEIPVKVAANPNLVRLKLFNNSFTGKLPEDLGRNSDLQELDISTNDFVGELPKYVCERNKLQRLVTFRNRFSGTLPDQYGDCHSLDYVRIEFNQLSGEVPPEFWKLPGLEILKMNNNLLEGSVSISSAQRLSLLRIADNRFSGHFSAEICELHDIREIDISRNQFTGEVPSCITGLKKLQKLSMQENMFTGAIPRNVNSWTDLTLLNLSYNRFSGTIPPELGNLPGLSSLDLAMNVLTGGIPPELAKLKLSQFNLSGNKLSGNVPSGFNNEFYLSGLVGNPNLCSEVMKFLQPCSKSKHFSSIVIIVLSTFAVLLLGFLLLFLKSKKSLFLTDKSKRSFRTTAFHMVGFNEEDVAPLLTSENLIGTGSSGQVYRVKLKTGETVAVKKLWEGRAGKLNSTDSVFKTEIETLGRIRHVDIVKLLYSCSADDFQILVYEYLENGSLSDVLHGEKCSELMDWSRRFNIAVGAARGLAYLHHDCVPPIVHRDVKSSNILLDRDFRPRLADFGLAKTLQPKAKEDGRRATSRIAGSYGYIAPEYAYTLKVTEKSDCYSYGVVLMELITGKRPNDPSFGENRDIVKWLTETALSSSTGGGSGDIEGHRSFLVKIVDPRLNPSTCDYEEIGKVLRVALLCTSTFPINRPTMRRVVDLLRGHKTRQLQEDLERSFLGKNERISNSVGCQRRDENGTRKFYSFDFQYSESKAAVVGFMMMIAVKFESYFHLIRLKLTPFGSLKISPEKWKWKGKLISHSLVRWNWTPEKSISFKILENHFCSWSYENPSMLSSALSPRRYLTVPSLQFALVSSYSYLKQRSDISPFRLWKMFI 1149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g1246 1149 Pfam Leucine rich repeat 218 278 IPR001611 GO:0005515
Lele55g1246 1149 Pfam Leucine rich repeat 146 204 IPR001611 GO:0005515
Lele55g1246 1149 Pfam Protein kinase domain 686 894 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele55g1246 1149 SUPERFAMILY Protein kinase-like (PK-like) 685 976 IPR011009 -
Lele55g1246 1149 ProSitePatterns Protein kinases ATP-binding region signature. 690 721 IPR017441 GO:0005524
Lele55g1246 1149 Gene3D Phosphorylase Kinase; domain 1 667 763 - -
Lele55g1246 1149 SMART serkin_6 684 976 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele55g1246 1149 FunFam Leucine-rich repeat receptor-like protein kinase TDR 313 622 - -
Lele55g1246 1149 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 66 312 - -
Lele55g1246 1149 Gene3D Transferase(Phosphotransferase) domain 1 764 998 - -
Lele55g1246 1149 ProSiteProfiles Protein kinase domain profile. 684 982 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele55g1246 1149 SUPERFAMILY RNI-like 72 382 - -
Lele55g1246 1149 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 237 977 - -
Lele55g1246 1149 Pfam Leucine Rich Repeat 291 311 IPR001611 GO:0005515
Lele55g1246 1149 Pfam Leucine rich repeat N-terminal domain 31 68 IPR013210 -
Lele55g1246 1149 Gene3D Ribonuclease Inhibitor 314 623 IPR032675 -
Lele55g1246 1149 SUPERFAMILY RNI-like 273 607 - -
Lele55g1246 1149 Gene3D Ribonuclease Inhibitor 29 313 IPR032675 -
Lele55g1246 1149 ProSitePatterns Serine/Threonine protein kinases active-site signature. 809 821 IPR008271 GO:0004672|GO:0006468
Lele55g1246 1149 FunFam Leucine-rich repeat receptor-like protein kinase 764 991 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g1246 Lele-ChrLele55 19026695 19030708 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g1246 25 981 Receptor kinase-like Gene Family AT5G65710 54.974 0.0 1034
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele55g1246 Pkinase 5.6e-44 CL0016