Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g1244 ATGTGTACGTATAGTATAGTGGCCGCTTCCTCCTCCTCCGCCGGAGCTCTGAAACTACACGTACCCCAAAGCCCCACAAAGATGAGGCTTCTCCTCTTGCTGCTCCTCCTCCTTCATCACTCCTCCTCTGCTCCCATGTCTGAGTACCGTGCACTTCTTTCCCTGAAAGCAGCCATTACCGACGATCCCCACTCGTCTCTCTCCTCCTGGAACGCCTCCACCAGTCACTGTACCTGGTCAGGTGTCACCTGCGACTTCCGCCGCCACGTCATATCTCTTAACTTAACCAGCCTTGAGCTCTCCGGCTCACTCTCCAATGATATTGCTCACCTCCCATTTCTCACTAATCTCTCCGTAGCTGACAATCAGCTCTCCGGACCCATCCCGCCGGGGATTTCTGTTGTCACTGGCCTACGATTCCTCAACCTTTCTAACAATGTGTTTAACGGAACTTTCCCTGCTCAGCTTTCCGAGCTAAAGAATCTTCAGGTCCTCGACCTTTATAACAACAACATGACCGGAGACCTTCCGCTCGTTGTGACCCAGATGCCGAATCTCCGGCATTTGCATCTGGGAGGGAACTTTTTCGCGGGGCAGATCCCTTCGGAGTATGGGCGGTGGGAACACTTGGAATATTTGGCTGTTTCCGGTAATGAACTAGCCAGCACTATACCGCCGGAGATCGGCAACTTGACGAAGCTCCGGGAGCTTTACATTGGATATTACAACACTTACGACGGCGGTTTACCACCAGAGATTGGCAACTTGTCGGAATTAGTCAGGTTCGACGCGGCAAACTGTGGATTAACAGGCGAGATTCCTCCGGAAATCGGGAAGCTTCAGAAACTCGACACACTGTTTCTTCAAGTGAATGCGCTTTCGGGGCCTTTGACACCTGAGCTTGGGAGCTTGAAGAGTTTAAAATCAATGGATTTGTCCAACAATATGCTTGCCGGTGAGATTCCGGAGAGTTTTGCTGAGCTAAAGAACATGACTCTTTTGAACCTGTTCAGAAACAAGCTTCATGGAGCTATTCCTGATTTCATCGGTGAACTACCTTCCTTGGAGGTATTACAGCTTTGGGAGAACAACTTCACTGGGAGCATTCCTCAGGGTCTGGGGCAGAATGGGAGGCTTGTTCTTGTTGATCTTTCATCTAACAAAATAACCGGTTCTTTGCCTCCTAATATGTGCAATGGGAATCAGCTTCAGACTCTAATAACTCTTGGAAATTTCTTGTTTGGTCCTATCCCTGAATCACTCGGGAAGTGCGAGTCATTAACACGAATTCGTATGGGAGAGAACTTTCTGAATGGTTCAATTCCTAAAGGCCTCTTTGGGCTTCCCAAACTTTCACAGGTTGAACTTCAAGACAATCTTCTCTCCGGGCAATTTCCTGAGGGGGCTTCCTTTTCTGTTAATCTTGGTCAGATTAGTCTATCCAACAACAATCTTTCTGGTCCTTTGCCACCTACTATAGGTAACTTTTCCGGAATGCAAAAGCTCCTTCTGGACGGTAACAAATTCTCAGGTCAAATACCTCCTCAGATTGGGAGATTACAGCAGCTTTCGAAGGTAGATTTTAGCCACAATAAGTTCTCGGGCCCTATCGCCCCAGAAATCAGTAAATGCAAGTTACTGACATTCGTTGATCTTAGTCGTAACGAGCTTTCTGGTGAGATTCCAAACGAATTAACCGGTATGCGGATTCTCAATTACTTGAATCTCTCTAGAAATCACCTTGTTGGCAGCATTCCCTCATCGATATCAAGCATGCAAAGTTTAACCTCTGTTGATTTTTCATATAACAATCTATCCGGTTTGGTTCCTGGCACTGGCCAATTCAGTTACTTCAACTACACATCTTTCCTCGGCAACCCTGAACTCTGTGGTCCTTATTTGGGTCCTTGCAAGGACGGTGTTGCTAATGGTGCTCACCCACCTCATGTTAAAGGTCCATTGTCTTCTTCCTTGAAACTTCTCCTGGTTCTTGGGTTGCTATTATGCTCGATTGCATTTGCAGTTGCCGCTATAATTAAAGCACGATCATTGAAGAAGGCAAGTGAAGCTCGTGCATGGAAGTTAACAGCATTCCAGCGTTTGGATTTCACTGCGGATGATGTTTTAGATTGCTTGAAGGAGGACAATATAATAGGTAAAGGAGGTGCAGGAATTGTGTACAAGGGTGCTATGCCTAATGGTGATCAAGTTGCTGTAAAAAGGTTGCCGGCCATGAGTAGAGGATCTTCCCATGATCATGGTTTCAATGCAGAGATCCAGACATTGGGGAGAATCCGACACAGACACATTGTTAGGTTGTTGGGTTTCTGTTCAAACCATGAAACTAATCTTTTGGTGTATGAATACATGCCCAATGGAAGCCTAGGTGAAGTTCTTCATGGTAAAAAAGGGGGTCACCTGCATTGGGACACAAGGTATAAAATTGCTGTGGAGGCTGCAAAGGGGCTGTGTTATCTCCACCATGACTGTTCCCCTCTTATTGTTCATCGAGATGTGAAGTCGAACAATATCCTTCTTGACTCCAACTTCGAAGCGCATGTTGCTGATTTTGGGCTTGCCAAGTTTCTGCAAGATTCTGGAACATCTGAATGCATGTCTGCTATCGCCGGTTCATATGGATACATAGCACCAGAATATGCCTACACACTGAAAGTTGATGAGAAAAGCGATGTGTACAGTTTTGGAGTAGTTCTTCTCGAGCTTATAACAGGGAGGAAACCAGTTGGGGAATTTGGTGATGGTGTGGACATAGTGCAATGGGTGAGGAAGATGACAGACTCCAACAAGGAACGAGTTCTGAAAGTTCTTGACCCAAGACTTCCCTCAGTTCCTCTTCACGAGGTGATGCATGTGTTCTATGTGGCAACTTTGTGTGTTGAAGAACAAGCAGTAGAGAGACCAACCATGCGTGAAGTTGTTCAAATCCTAACAGAGCTCCCAAAGTTACCTTCTTCTAAACAGGGAGGAGACTTGTCAACCACAGAGTCATCTCTGTCTTCATCAAACCCTCTAGATTCTCCAAAAACAGAACTGAAAGATCATCAGCATCCTCCTCAATCTCCACCACCTGATCTTCTTAGCATTTAG 3108 0.4617 MCTYSIVAASSSSAGALKLHVPQSPTKMRLLLLLLLLLHHSSSAPMSEYRALLSLKAAITDDPHSSLSSWNASTSHCTWSGVTCDFRRHVISLNLTSLELSGSLSNDIAHLPFLTNLSVADNQLSGPIPPGISVVTGLRFLNLSNNVFNGTFPAQLSELKNLQVLDLYNNNMTGDLPLVVTQMPNLRHLHLGGNFFAGQIPSEYGRWEHLEYLAVSGNELASTIPPEIGNLTKLRELYIGYYNTYDGGLPPEIGNLSELVRFDAANCGLTGEIPPEIGKLQKLDTLFLQVNALSGPLTPELGSLKSLKSMDLSNNMLAGEIPESFAELKNMTLLNLFRNKLHGAIPDFIGELPSLEVLQLWENNFTGSIPQGLGQNGRLVLVDLSSNKITGSLPPNMCNGNQLQTLITLGNFLFGPIPESLGKCESLTRIRMGENFLNGSIPKGLFGLPKLSQVELQDNLLSGQFPEGASFSVNLGQISLSNNNLSGPLPPTIGNFSGMQKLLLDGNKFSGQIPPQIGRLQQLSKVDFSHNKFSGPIAPEISKCKLLTFVDLSRNELSGEIPNELTGMRILNYLNLSRNHLVGSIPSSISSMQSLTSVDFSYNNLSGLVPGTGQFSYFNYTSFLGNPELCGPYLGPCKDGVANGAHPPHVKGPLSSSLKLLLVLGLLLCSIAFAVAAIIKARSLKKASEARAWKLTAFQRLDFTADDVLDCLKEDNIIGKGGAGIVYKGAMPNGDQVAVKRLPAMSRGSSHDHGFNAEIQTLGRIRHRHIVRLLGFCSNHETNLLVYEYMPNGSLGEVLHGKKGGHLHWDTRYKIAVEAAKGLCYLHHDCSPLIVHRDVKSNNILLDSNFEAHVADFGLAKFLQDSGTSECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRKPVGEFGDGVDIVQWVRKMTDSNKERVLKVLDPRLPSVPLHEVMHVFYVATLCVEEQAVERPTMREVVQILTELPKLPSSKQGGDLSTTESSLSSSNPLDSPKTELKDHQHPPQSPPPDLLSI 1035
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g1244 1035 ProSiteProfiles Protein kinase domain profile. 712 989 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele55g1244 1035 Gene3D Transferase(Phosphotransferase) domain 1 790 1001 - -
Lele55g1244 1035 SUPERFAMILY Protein kinase-like (PK-like) 708 983 IPR011009 -
Lele55g1244 1035 MobiDBLite consensus disorder prediction 993 1013 - -
Lele55g1244 1035 SUPERFAMILY L domain-like 376 637 - -
Lele55g1244 1035 Gene3D Phosphorylase Kinase; domain 1 679 789 - -
Lele55g1244 1035 SUPERFAMILY RNI-like 92 437 - -
Lele55g1244 1035 Pfam Protein tyrosine and serine/threonine kinase 714 983 IPR001245 GO:0004672|GO:0006468
Lele55g1244 1035 SMART LRR_typ_2 304 327 IPR003591 -
Lele55g1244 1035 SMART LRR_typ_2 352 376 IPR003591 -
Lele55g1244 1035 SMART LRR_typ_2 592 615 IPR003591 -
Lele55g1244 1035 SMART LRR_typ_2 207 231 IPR003591 -
Lele55g1244 1035 SMART LRR_typ_2 159 183 IPR003591 -
Lele55g1244 1035 SMART LRR_typ_2 448 472 IPR003591 -
Lele55g1244 1035 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 356 641 - -
Lele55g1244 1035 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 247 985 - -
Lele55g1244 1035 Gene3D Ribonuclease Inhibitor 106 374 IPR032675 -
Lele55g1244 1035 Gene3D Ribonuclease Inhibitor 42 105 IPR032675 -
Lele55g1244 1035 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 105 348 - -
Lele55g1244 1035 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 681 789 - -
Lele55g1244 1035 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 790 1000 - -
Lele55g1244 1035 Pfam Leucine Rich repeats (2 copies) 160 198 IPR025875 -
Lele55g1244 1035 Gene3D Ribonuclease Inhibitor 375 641 IPR032675 -
Lele55g1244 1035 MobiDBLite consensus disorder prediction 989 1035 - -
Lele55g1244 1035 ProSitePatterns Serine/Threonine protein kinases active-site signature. 834 846 IPR008271 GO:0004672|GO:0006468
Lele55g1244 1035 Pfam Leucine rich repeat N-terminal domain 47 85 IPR013210 -
Lele55g1244 1035 SMART serkin_6 712 982 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g1244 Lele-ChrLele55 18997843 19001883 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g1244 41 1035 Receptor kinase-like Gene Family AT5G65700 81.700 0.0 1635
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele55g1244 PK_Tyr_Ser-Thr 6e-47 CL0016