Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g1235 ATGGCTGGTCTGGATTTAGGCACTACTTCTCGCTTTGTTCCAAATCTCCACAGACCTAACTTGCACCTCCCTCAGCAGCAGCGGCTGCAACACGATTCCGAAGAAGATGCGCATCGGCCCGATCCCTTTTCGGGCGACGACGGTCCCCACCAAGGCCTAGAGCTCGCCTCCGCCGGACCTGGCGACATCGTGGGCCGTCGACCCCGCGGAAGGCCACCGGGCTCCAAGAACAAGCCCAAACCACCGGTCATAATAACCAGAGAGAGTGCCAACACCCTCCGAGCTCATATTCTCGAAGTCGGCAACGGTTGCGACGTGTTCGACTGCGTCGCCACCTACGCTCGCCGGAGGCAGCGTGGGATCTGTATTCTAAGCGGAAGTGGCACGGTGACGAATGTGACCCTAAGGCAACCTGGAGGTGCTGGAGCTGTAGCGAGTCTTCACGGGAGGTTTGAGATATTGTCGTTGTCGGGATCGTTCCTACCGCCTCCGGCGCCGCCCGGTGCCACCAGTCTTACGATATACTTAGGCGGAGGGCAAGGACAAGTGGTCGGAGGAAGCGTGGTGGGAGAGCTGAGGGCGGCGGGTCCGGTGATCGTGATTGCTTCTTCGTTTACGAACGTGGCGTACGAGAGACTTCCGTTGGACGACGAGGAGCAGGAGCAGCTTCAGATGCAGACACCTGGCTCCGGTCAGGGCGGTTCCGGTGGCGGAGGTGGGAATAACTCGTATCCTGACCCATCTTCCGGGCTACCTTTCTTCAATTTGCCGCTTAATATGCCGCAGCAGCAGCACAATGTTCAGTTGCCGGTCGACGGCTGGACCGGAAACTCCGGTCCGGGTCCATCCTTTTAA 855 0.593 MAGLDLGTTSRFVPNLHRPNLHLPQQQRLQHDSEEDAHRPDPFSGDDGPHQGLELASAGPGDIVGRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEVGNGCDVFDCVATYARRRQRGICILSGSGTVTNVTLRQPGGAGAVASLHGRFEILSLSGSFLPPPAPPGATSLTIYLGGGQGQVVGGSVVGELRAAGPVIVIASSFTNVAYERLPLDDEEQEQLQMQTPGSGQGGSGGGGGNNSYPDPSSGLPFFNLPLNMPQQQHNVQLPVDGWTGNSGPGPSF 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g1235 284 Gene3D - 93 228 - -
Lele55g1235 284 MobiDBLite consensus disorder prediction 1 83 - -
Lele55g1235 284 Pfam Plants and Prokaryotes Conserved (PCC) domain 94 207 IPR005175 -
Lele55g1235 284 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 32 239 IPR014476 GO:0003680
Lele55g1235 284 FunFam AT-hook motif nuclear-localized protein 93 220 - -
Lele55g1235 284 MobiDBLite consensus disorder prediction 220 284 - -
Lele55g1235 284 ProSiteProfiles PPC domain profile profile. 90 226 IPR005175 -
Lele55g1235 284 CDD DUF296 94 169 IPR005175 -
Lele55g1235 284 SUPERFAMILY AF0104/ALDC/Ptd012-like 90 224 - -
Lele55g1235 284 MobiDBLite consensus disorder prediction 219 284 - -
Lele55g1235 284 MobiDBLite consensus disorder prediction 28 45 - -
Lele55g1235 284 PIRSF ESCAROLA 7 284 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g1235 Lele-ChrLele55 18916012 18916866 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g1235 1 279 AT-hook Motif Nuclear Localized (AHL) Family AT4G17800 66.013 1.68e-99 291