Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g1226 ATGCGAGTATATCGCATAAAGAGAATTGAGGAGGGAGGAATGAGTTCTGAAATGTTCCAAAACAAAAGAAAAATCACCAAAGCACTTTTCTCAAAGTCACTTTTGGTGACGAAATCAGTGAATAAAAGAAAAGGTTTTCGTTTCCACCCAACAGACGAAGAACTGGTTGGATATTATCTAAAGAGAAAGGTAGAAGGGCTTGAAATAGAGCTTGAGGGTGGCTTTGGTTTTGCATTGTGCAGAGTGATGAAGAAGAATGAGAAGGCGAAGGATTCGCAGGAAGAACAAAAGGGCAAGGCAGAAGGAAGTAGTTGCACCAGTGGGAATGAAGAAGCTTCAATGAAGACTTCTCCATACCATGCTGCTCCAACAATGGCAGAGCTAGAGCAAGCTTCTTCACATTTTGATGACTACTCTCAAGTACCAGATACCATGTCTGGATGCTTTCCAGAGTACGACTTATCATTTTCAATGACTCCATGGCAACCATTCCTACCAACAGAAAATTCAACCTCTTCATCTTACTCAAATGTAAATGGAGAAATTGAACTTGCTGAAGATCTCAGTCAATTTGGCTACTTCTATGGAAATGAGCATGTGTCTCATGAAGGCTTTGATCAAATCAATTCATTCAAATATCCAAAACCGTTCTGA 654 0.4006 MRVYRIKRIEEGGMSSEMFQNKRKITKALFSKSLLVTKSVNKRKGFRFHPTDEELVGYYLKRKVEGLEIELEGGFGFALCRVMKKNEKAKDSQEEQKGKAEGSSCTSGNEEASMKTSPYHAAPTMAELEQASSHFDDYSQVPDTMSGCFPEYDLSFSMTPWQPFLPTENSTSSSYSNVNGEIELAEDLSQFGYFYGNEHVSHEGFDQINSFKYPKPF 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g1226 217 Pfam No apical meristem (NAM) protein 44 71 IPR003441 GO:0003677|GO:0006355
Lele55g1226 217 MobiDBLite consensus disorder prediction 88 118 - -
Lele55g1226 217 MobiDBLite consensus disorder prediction 99 114 - -
Lele55g1226 217 SUPERFAMILY NAC domain 33 70 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g1226 Lele-ChrLele55 18834372 18836814 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g1226 45 72 NAC Transcription Factor Family AT4G17980 89.286 2.00e-11 60.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele55g1226 NAM 1.1e-07 No_clan