Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g1224 ATGGGATGTGGATTTCCCAAACTCTGTTCCTGCTTTGAACCTGTAAATCAGACGGCGACGGCCACAGCTAAGAACCAACCGGACCATCAGCAGGACAGGATTTCTTCCCCGACTGAGCATTTGGACGGAACTCTAGGCCACTCCTTCCATTATGTCAGATCTTCTGCTCGCTTGATTTCACCGGCTCACTCCGATCGCTTTGTCTCTCCTCCTTCTAACTCCCTTCGCTTCTCTCCCACCCGCGAACCCGTTATCAGAGCCCGACCCGATCATCCGGAAACTGGGTTCAGGGCCATTTCCGGAGCTTCGGTGAGTGCCAACAATTCGACTCCGAAAACTGTTCTTCAGATGGAAGATATCCACGATGAAGCCAATGATGATACCGCTCATGAATGTGGCGTGAGGGGAATTATTGTGAATGGGTTCGAAAGCACATCTTCGTTTAGAACTCTTCCGCTTCAGCCGGCACCGAGAGGGGAAGCTCACTTTCTCTCCGGTCCAATTGAGCGTAGTGCCCTCTCTGGGCCTCTTGAGGCAAACAACGCCACAGCAGAAACTGGAAGCGAGGTCTCTTTTTCGGCTCCTCTGGGCGGCTTTTATACCAAAAAGAAGCGGAAGAGAGCGTTTTCACAATTGCGTAAGGCATTTCATCTTGCCATTTCGGAGAAGAAGCAGCCAGGGGTGTTGCCGGTGATGAAATTCGTGGGCAAAAAGGAAGCTCCGTCGAACGAAGATAAGCCGGAGATAAAGAGTGAAAGCCGCGTACAGTGGGCGCTTGGGAAAGCGGGAGAGGATCGGGTACATGTGGTTGTATCAGAAGAACAAGGCTGGCTGTTCGTCGGGATTTACGACGGCTTCAATGGCCCCGACGCGCCGGAATTCCTAATGTGCCATATTTATCGTGCTGTTGACAATGAACTAAAAGGTTTGTTGTGGGAAGAAGTTGAAGAAGACACAGGGGAAACTGAAACTGAAACCTCAACGGGAAGAAAATCACAGGAAGAGATCAAAACAGAGGGTGAAATTTCAGTATGTTTAGAAGATACGAATCCTCAGATGTTCCAGGCAGAAGGAACTGAAAGTAGACGACGCATGCTATGGGAATTTCTTGCAGAGGAAGACGATCGTGCAGATGTTATTGATCTTTCAGGCTCAGAAAGATTTGAATTTTCCGTCCTTGACGAAATCAACGCAGGCTCAGCAGTTAGTAGACGTTGGCCATTACCAAAACATAAGAGGGTCCACGGTGGTGGTAAGTTTTCACCACCGTCGACAGAATATCATAAAGAGAAGGTTGACGCAGAAAACGACAAGTCTTTTGGTGGAGGAAGGAAGAGAAAGGTGGGCCCCGTGGATCATGATTCAGTGTTGAGGGCATTGTCTCGGGCTCTTGAAGCCACCGAAGCTGCATATTTGGAGATGACAGACAAGCTTCTTGATTCAAACCCAGAACTTGCTTTAATGGGGTCGTGTGTTTTAGTTGTTTTGATGAGGGACGAGGATGTTTACGTGATGAACGTGGGAGATAGCAGAGCCATTGTCGCAGAATATAAGCCCAGAGAGTTGGAATTGAGATGTGAGGTAAATAATGAAACAATCAAGTTGGAGAATGAGGATTCTGGTCAAGAAATGAGGTTAGTTGCATTGCAGGTTTCCACCGACCATAGTACCAGCATTGAAGAGGTACGCTCAACTTTAAGGCTTCTGAACTGTTTTGGTGTGATAAGAATTAAGAACGAACATCCTGATGATAGCCACTGCATTGTGAATGGTAGAGTGAAAGGTCGTCTTCAGGTGACCAGAGCATTTGGGGCGGGATTTTTGAAACAGCCCAAGTTGAATGATGCAGTGCTCGAAATGTTTCGTAATGATTATATAGGCACTGCTCCATATATTTCATGCTCTCCTTCGCTCTGCCATCATAGATTAAGCCACGGAGATCAGTTCTTGATCCTCTCATCTGATGGCTTACATCAATATTTAACAAATCAAGAAGTGGTTTCTCAGGTTGAGAACTTTATGGACAAGTTTCCAGATGGAGATCCTGCCCAGCATTTGATCGAGCAGCTACTACTCCGTGCTGCCGACAAGGCCGGAATGGCTGTGCGAGAGTTGCTGGATATTCCGCAAGGTGATAGAAGGAAGTACCATGACGATGTAACTGTCATGGTGATATCACTGGAAGGAAGGATCTGGAAATCATCGGGCAAGTATCTGTGA 2220 0.4743 MGCGFPKLCSCFEPVNQTATATAKNQPDHQQDRISSPTEHLDGTLGHSFHYVRSSARLISPAHSDRFVSPPSNSLRFSPTREPVIRARPDHPETGFRAISGASVSANNSTPKTVLQMEDIHDEANDDTAHECGVRGIIVNGFESTSSFRTLPLQPAPRGEAHFLSGPIERSALSGPLEANNATAETGSEVSFSAPLGGFYTKKKRKRAFSQLRKAFHLAISEKKQPGVLPVMKFVGKKEAPSNEDKPEIKSESRVQWALGKAGEDRVHVVVSEEQGWLFVGIYDGFNGPDAPEFLMCHIYRAVDNELKGLLWEEVEEDTGETETETSTGRKSQEEIKTEGEISVCLEDTNPQMFQAEGTESRRRMLWEFLAEEDDRADVIDLSGSERFEFSVLDEINAGSAVSRRWPLPKHKRVHGGGKFSPPSTEYHKEKVDAENDKSFGGGRKRKVGPVDHDSVLRALSRALEATEAAYLEMTDKLLDSNPELALMGSCVLVVLMRDEDVYVMNVGDSRAIVAEYKPRELELRCEVNNETIKLENEDSGQEMRLVALQVSTDHSTSIEEVRSTLRLLNCFGVIRIKNEHPDDSHCIVNGRVKGRLQVTRAFGAGFLKQPKLNDAVLEMFRNDYIGTAPYISCSPSLCHHRLSHGDQFLILSSDGLHQYLTNQEVVSQVENFMDKFPDGDPAQHLIEQLLLRAADKAGMAVRELLDIPQGDRRKYHDDVTVMVISLEGRIWKSSGKYL 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g1224 739 MobiDBLite consensus disorder prediction 22 42 - -
Lele55g1224 739 ProSiteProfiles PPM-type phosphatase domain profile. 249 727 IPR001932 -
Lele55g1224 739 SMART PP2C_4 248 725 IPR001932 -
Lele55g1224 739 CDD PP2Cc 452 727 IPR001932 -
Lele55g1224 739 MobiDBLite consensus disorder prediction 412 446 - -
Lele55g1224 739 MobiDBLite consensus disorder prediction 323 337 - -
Lele55g1224 739 Coils Coil 457 477 - -
Lele55g1224 739 MobiDBLite consensus disorder prediction 424 446 - -
Lele55g1224 739 SUPERFAMILY PP2C-like 260 728 IPR036457 -
Lele55g1224 739 MobiDBLite consensus disorder prediction 316 337 - -
Lele55g1224 739 PANTHER PROTEIN PHOSPHATASE 2C 245 726 IPR015655 GO:0004722|GO:0006470
Lele55g1224 739 FunFam Protein phosphatase 2C 29 344 734 - -
Lele55g1224 739 Pfam Protein phosphatase 2C 467 516 IPR001932 -
Lele55g1224 739 Pfam Protein phosphatase 2C 576 682 IPR001932 -
Lele55g1224 739 Gene3D - 231 734 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g1224 Lele-ChrLele55 18828338 18830830 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g1224 1 739 PP2C-type Phosphatase Gene Family AT2G35350 51.925 0.0 694