Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g1223 ATGGGTGAGATTGTGGAGGAGTTGAATCCCCTTGTTGGAGGTAACGAGGGGCATGAATTCGATAATATTAGTAAGGTGGAGATCGTCCTCAAAACCATTGGCCCTGCTCGCCCTTCTCGTCTTCTTGTTCCATCTTCCATCAAGGTTCGTGATTTGAGAGGATTGATTGCCAGCAATGGCCGTTTACTGATTGATAATTTGAGTATTATTCTGCGTGGAAATGTATTATGTGATATGAAAAATGGAGATGACATGTACGTTCAACTCAATGATGGAGGTAAAGATTCTCTAATTGTTGCTGTCAAACCAAAGCCACCAGTTCGTGATGGATATGACGAGGATGATGATGATGATCTGGTAAAAATCAGTTTAATAACGTCTGAAGTGAATATAAAGTCAATATGATATCCTTTTGATGTTTATATTCTCTCTGAGCTTGAAAGCATGGGCTCTCACATTTATGTGATACTTGCTACAGGTTTTTGTCTAATTCTCTTTAACCTTGGAAAGCGCCAAGCTGGTGACATCAGTGCATATTCAATCTTCAATGAAGATTTTAGAGAGCTTCCAGGGACCCTTAATGCAGATCGGCTTGATAGAGATATAAGAGCAGGACAGTTTTGA 624 0.399 MGEIVEELNPLVGGNEGHEFDNISKVEIVLKTIGPARPSRLLVPSSIKVRDLRGLIASNGRLLIDNLSIILRGNVLCDMKNGDDMYVQLNDGGKDSLIVAVKPKPPVRDGYDEDDDDDLVKISLITSEVNIKSIXYPFDVYILSELESMGSHIYVILATGFCLILFNLGKRQAGDISAYSIFNEDFRELPGTLNADRLDRDIRAGQF 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g1223 207 PANTHER UNCHARACTERIZED 127 207 IPR039159 -
Lele55g1223 207 Pfam Uncharacterized conserved domain (SAYSvFN) 152 202 IPR019387 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g1223 Lele-ChrLele55 18820784 18824421 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele55g1223 55 18820784 18824421 Lele49g0416 49 2415567 2418667 CCT
Lele55g1223 55 18820784 18824421 Lele50g0445 50 2545717 2548717 CCT
Lele55g1223 55 18820784 18824421 Lele51g0427 51 2462470 2467478 CCT
Lele55g1223 55 18820784 18824421 Lele52g0443 52 2622005 2625353 CCT
Lele53g0264 53 2180479 2184092 Lele55g1223 55 18820784 18824421 hybridization
Lele54g0267 54 2251463 2254345 Lele55g1223 55 18820784 18824421 hybridization