Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g1220 ATGAATTCCCAGAAGAAGCAATTGAAGAAAATGATCACTCCCATCAGAACAGAGATCATATCGAGAAAATGCATCAAGCCAACCTCACCCACACCACCGCACCTTAAATCCTTTAAGCTTTCCCTTCTAGACCAGCTTTCCCCTAACATCCATGGGAACATGACCCTCTTCTACTCTTCCAACGCCGCCACGGACGGTGGCTCCGGTGGCCTCCTCTCCGACTTCTTGGCCAAATCACAACTTCTCCAAAACGCCCTAGCCCAAACGCTCACCCGCTTCTACCCTCTCGCCGGCCGCATCCGTGACACAGCCACCATTGACTGCAACGATGACGGTGTCTTCTACCTGGAAGCTCGAACGGACACTCATCTTTCCGACTTCCTCAGCCACCCAGACTTTGATACTCTCGAACATTTCTTACCTTCCACCGACAGGGAAACCATGGAATTGTCGAACGGTTCTATGTTCCTCGTACGGTTCATGTTGTTCGGTTGCGGTGGAACTGCCGTGAGCATATCTCTCACCCACAAGATCGCCGATATAGCAGCCTTGATCACAATCCTTCAGACCTGGACCGCCACGTGTCGTGCACGTACTGAACCGGACGTTCCTGACTTGGGCCTCGGCGCTTCTCTATTTCCTCCTCGAGACATTCCGGGGATGATGTCCGTATCTGTAAATATCGCCGCCGAGAAGTTCACAGCAAGACGGTTCGCATTCACCAGTTCCAAGGTGGGAGAGCTCAAGAGCAGAGTGGTAACTGCACTCATCGGAGGAGACAAGTCCAACGACGTAATGGACATTCAGTTCCACCCGTCGCGTGTGGAAGTGGTGCTAGCTCTGATATGGAGATGCGCGATGTTGGCTTCCCGCTCCAAAACGGGGTCGTTTAAACCGTCGGCACTGTTCCAAGCTTTGAACCTTCGTCCCCGAATGGAGCCGCCAGTACCGGGGATGGCCATCGGGAACTTCGTTTGGCCGTTTGCTGTAACGGTGGAGGAAGAGAAGGAGATGGAATTGCACGAGTTGGTGAAGAAGATGAGAGAGGGAATGAAGGAGTTCATAGAGAAGAAGGCAAGCAAGTTCAGAGAAGGAGGTGGGTTTGAAGCTGTAATGGAGTTTCTGAAAGAGAGGAGAGAGATGTTGAAGAAGAAGAAGGAGACAGTGATTTATAAGTGTTCGAGTTGGTGTAGGTTTCCATTGTACGAGGTGGATTATGGGTGGGGGATTCCTGTGTGGATGTCGAGTGTGAATAAGTTGGTGAGTAATACAATTGCTTTGATGGATATGAAAGATGGTGGAGTTGAAGCTCTGGTGACTTTGAATGAGCAGGATATGGATATCTTTGAACAACATCATGAATTTCTTCAATATGCTCTGCTCAGTCCTAGTATTGTTATTTGA 1404 0.4993 MNSQKKQLKKMITPIRTEIISRKCIKPTSPTPPHLKSFKLSLLDQLSPNIHGNMTLFYSSNAATDGGSGGLLSDFLAKSQLLQNALAQTLTRFYPLAGRIRDTATIDCNDDGVFYLEARTDTHLSDFLSHPDFDTLEHFLPSTDRETMELSNGSMFLVRFMLFGCGGTAVSISLTHKIADIAALITILQTWTATCRARTEPDVPDLGLGASLFPPRDIPGMMSVSVNIAAEKFTARRFAFTSSKVGELKSRVVTALIGGDKSNDVMDIQFHPSRVEVVLALIWRCAMLASRSKTGSFKPSALFQALNLRPRMEPPVPGMAIGNFVWPFAVTVEEEKEMELHELVKKMREGMKEFIEKKASKFREGGGFEAVMEFLKERREMLKKKKETVIYKCSSWCRFPLYEVDYGWGIPVWMSSVNKLVSNTIALMDMKDGGVEALVTLNEQDMDIFEQHHEFLQYALLSPSIVI 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g1220 467 Pfam Transferase family 18 455 - -
Lele55g1220 467 Gene3D - 230 459 IPR023213 -
Lele55g1220 467 Gene3D - 15 221 IPR023213 -
Lele55g1220 467 PANTHER F21J9.9 18 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g1220 Lele-ChrLele55 18812865 18814881 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g1220 15 451 Monolignol Biosynthesis Gene Families AT5G48930 21.822 3.70e-24 102