Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g1204 ATGAAGTTTGCCTTGTTTCTCCTACTGATTTTGGCTGTTTTGAAATTCTCAAGTGGCTCCGATCTCATTACTAAATCTTGCAGAGAAGCCTCAAATGGTGACCCAAACATCAACGACGATTTCTGCGTTGCGAGCCTTCGAGACATTTCGCCGAGTCCACCCGCTAGTAACGAAGATCTTGTAGCCATTTCAGTTCAGATAACAAAGACCAATGGAACAAACATAGTCTCCAACGTTTCCAATCTTTTGAAGGATCCTAAGCTGAGTGATTATGCAAAGAAATGCTTAAAAGATTGTTATGATCTTTACTCAGATTCTCTTTCAGATTTGGATGACGCCATTGCAGATTTCAAGTCCAAAGATTTCAACTCAGCGAATATGAAGATAACCGCAGCAATGGATGCCTCTGTTACCTGTGAAGACCAGTTCAAGGATGGGAATGGAAGGTCTCCTTTAACAGACGACAACAAAGTATACTTTGAACTCAACGCAATGTCTTTGGCTTTTATCAATATGCATAAATAG 525 0.4038 MKFALFLLLILAVLKFSSGSDLITKSCREASNGDPNINDDFCVASLRDISPSPPASNEDLVAISVQITKTNGTNIVSNVSNLLKDPKLSDYAKKCLKDCYDLYSDSLSDLDDAIADFKSKDFNSANMKITAAMDASVTCEDQFKDGNGRSPLTDDNKVYFELNAMSLAFINMHK 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g1204 174 FunFam Putative invertase inhibitor 18 173 - -
Lele55g1204 174 CDD PMEI-Pla_a_1_like 27 172 IPR034088 -
Lele55g1204 174 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 20 172 IPR035513 -
Lele55g1204 174 Gene3D Invertase/pectin methylesterase inhibitor family protein 18 173 IPR035513 -
Lele55g1204 174 SMART PMEI_2 18 169 IPR006501 GO:0004857
Lele55g1204 174 Pfam Plant invertase/pectin methylesterase inhibitor 21 168 IPR006501 GO:0004857
Lele55g1204 174 PANTHER PECTINESTERASE INHIBITOR-LIKE 6 169 - -
Lele55g1204 174 TIGRFAM PME_inhib: pectinesterase inhibitor domain 4 172 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g1204 Lele-ChrLele55 18693054 18693578 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g1204 86 143 Carbohydrate Esterase AT4G02300 36.667 4.66e-06 43.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g0285 53 2342055 2342687 Lele55g1204 55 18693054 18693578 hybridization
Lele54g0282 54 2373968 2374537 Lele55g1204 55 18693054 18693578 hybridization