Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g1197 ATGACGACGGCTTCGCCGGCACCCAACAACAGTAGCAGCAATGCGATCTCAAGTGCCGCTACAACAACCCCTTCCAAGCCTACAACCCTGGCTGCGGCTACTGGCTCGAGCCATCGTACGGACGTCGCTCCTAAATCCCAACGGGGACAGAATAAGCCCAAGTGCAGACAGTGTGGCAATGTTGCTCGTTCTAGGTGTCCATATGAACAATGCAAGAGTTGCTGTTCAAAAAATCAAAATCCTTGTCATATTCATGTGTTAAAAGCAAATTCAAGTCATTCCGAGAAGACACCAGCTTCTGCTGCTGCTGCGCTTGATCAGCAATCCTCAGAACCATCTCAATCCGGGAATGTTAGTAGAGCTGCATCACTTCGACAACTTTCCAACAGTTTTGCCCAGTTCAATAATTTGCATGTCTCACTTCGATCAAGGAAGCCACTAACTAGAAAGGATGCTGCAGTTATCAATGAATGGAGACTTTCCAAGTTAAAGGAGTACAGGGAGAGAAACATTGAAGTGGAAAATGAAGCTTTTGACCGATATATGCGGAACGTAGATTTACTGAAGGAAGTATTGCTTGTAGAGTCTATGGAGGACAATGCGCCCTCTGTATCAGATTCTAATCAAATTTCAATGGAGAACGACAATGAAACAGTGATCCAGAAGCTGAAGTTTCAGCTAAGGTCAAACTCAATCGGAAGTGATCGAATGAGAACTCAGATACAACAAATTGTGGATGAGGGATTAAAGAAAGCTCAAAAGTGGGCTTTAGATGGTCACAACAATGAATCAATTGATGAAGAAGAACCTAATCAAGATTCAAAAAGGGTCAGGACAGAAAGGCTATCAGTTATAAGTGATCTTATAGATAAAATCAGTAGAGCCCGAAATGAGGAGGATCTGAAATCATGCCAGGAGATGAAGTCACAAATTTTCAATTCTGATAAAGGCACTTGCACAATGGAACTTGAAGACAATGAAACGCCAAAGAATCAAATTGATGAAAGTGATACTGCACCCGTAAAAGAAATAGACTATTCTCTACCTAAATTGGTTGCCACTGCTGAAATTGATCAAGAAACTCTTGGCATCATAGACAAGCACTTTTCTTCTCTTGAGCATGTGGAGAATTTATGA 1137 0.4204 MTTASPAPNNSSSNAISSAATTTPSKPTTLAAATGSSHRTDVAPKSQRGQNKPKCRQCGNVARSRCPYEQCKSCCSKNQNPCHIHVLKANSSHSEKTPASAAAALDQQSSEPSQSGNVSRAASLRQLSNSFAQFNNLHVSLRSRKPLTRKDAAVINEWRLSKLKEYRERNIEVENEAFDRYMRNVDLLKEVLLVESMEDNAPSVSDSNQISMENDNETVIQKLKFQLRSNSIGSDRMRTQIQQIVDEGLKKAQKWALDGHNNESIDEEEPNQDSKRVRTERLSVISDLIDKISRARNEEDLKSCQEMKSQIFNSDKGTCTMELEDNETPKNQIDESDTAPVKEIDYSLPKLVATAEIDQETLGIIDKHFSSLEHVENL 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g1197 378 MobiDBLite consensus disorder prediction 1 56 - -
Lele55g1197 378 MobiDBLite consensus disorder prediction 1 54 - -
Lele55g1197 378 MobiDBLite consensus disorder prediction 93 121 - -
Lele55g1197 378 PANTHER ELECTRON CARRIER/IRON ION-BINDING PROTEIN 1 378 - -
Lele55g1197 378 Pfam Domain of unknown function (DUF702) 54 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g1197 Lele-ChrLele55 18582591 18586298 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Lele55g1197 DUF702 7.2e-07 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g0291 53 2431744 2435345 Lele55g1197 55 18582591 18586298 hybridization
Lele54g0289 54 2451730 2455654 Lele55g1197 55 18582591 18586298 hybridization