Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g1195 ATGAACTGTTTCTTCTTCAAAAAGAAATCTAATAGCAGGGGAGAATCAAAATCGGCGCCGGAATTGCAAAATGAGAGGCAGCGGAATAACCCGGCGGAGAACCGGGTTTGCAAGTCGACGAGTTCGATACCGTCGCCGAGGAGCGTGACGGAGTTGTACAAAGAGAAAGCAAAAGAGAACAATTTCAGAGTTTTTAGTTTGCAAGAGCTTCTAGAAGCAACAAATGGGTTCAGTAGGATGCTCAAGATTGGTGAAGGTGGCTTTGGTAGCGTGTATAAAGGTACGATTAGGCCTCCCGGTGGACGAGGCGATCCAATCGTCGTAGCCATAAAAAAGCTCAACAAGCATGGATTTCAGGGTCACAAAGAATGGCTTGCTGAAGTTCAATTTCTTGGCGTTGTAAATCATCCAAATCTGGTAAAACTTCTGGGATACTGCTCCGTTGATGGAGAAAGAGGAATCCAACGGTTGTTAGTGTATGAGTATATGGCAAATAGAAGCCTAGAGCATCATCTTTTTAATCCTTCTATTCCTACCTTGCCTTGGAAAAGAAGATTGCAGATCATGATCGGTGCTGCCCAAGGATTAACTTATTTGCATGAAGGATTGGAATTTCAGGTGATATACCGAGATTTCAAAACTTCAAATGTTCTATTGGATGCGGATTTCCAACCAAGGCTCTCAGACTTTGGTCTTGCAAGGGAAGGCCCCCAAGGCGATAAAACTCATGTATCTACTGCGGTGGTTGGAACACAAGGATATGCTGCCCCGGAGTATGTAGAAACAGGGCATCTCAAAGTTGAATGTGACATTTATACTTTTGGAGTGGTACTGTATGAGATCATCACGGGGAGACGAGCGTTAGACAGAAACCGTCCGGCTGCAGAACAAAAACTTCTAAGTTGGGTTAAACAGTATCCTGCTGACACCGGCAGATTCAGCATGATCATAGACCCTCGTCTCAGAAACCATTTTTCTCCCGGCGCAGTTCGCAAAGTTGCCAAGTTGGCTGACGCCTGTACTAGTAAGAATCCTCGAGAAAGGCCAACTATGTCTCAGATAGTGGAAAGCTTGAAGGGAGCATTGCAGGTTTCAGAGACCTCTGATACTTCTCAGAATGAAACAGCCGAATCATCTCGATCTTCTCGGGCTCGAAGAGGTAAATAA 1167 0.4499 MNCFFFKKKSNSRGESKSAPELQNERQRNNPAENRVCKSTSSIPSPRSVTELYKEKAKENNFRVFSLQELLEATNGFSRMLKIGEGGFGSVYKGTIRPPGGRGDPIVVAIKKLNKHGFQGHKEWLAEVQFLGVVNHPNLVKLLGYCSVDGERGIQRLLVYEYMANRSLEHHLFNPSIPTLPWKRRLQIMIGAAQGLTYLHEGLEFQVIYRDFKTSNVLLDADFQPRLSDFGLAREGPQGDKTHVSTAVVGTQGYAAPEYVETGHLKVECDIYTFGVVLYEIITGRRALDRNRPAAEQKLLSWVKQYPADTGRFSMIIDPRLRNHFSPGAVRKVAKLADACTSKNPRERPTMSQIVESLKGALQVSETSDTSQNETAESSRSSRARRGK 388
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele55g1195 388 PANTHER OS01G0588500 PROTEIN-RELATED 29 360 - -
Lele55g1195 388 MobiDBLite consensus disorder prediction 1 48 - -
Lele55g1195 388 Gene3D Transferase(Phosphotransferase) domain 1 163 386 - -
Lele55g1195 388 Gene3D Phosphorylase Kinase; domain 1 48 162 - -
Lele55g1195 388 SUPERFAMILY Protein kinase-like (PK-like) 55 358 IPR011009 -
Lele55g1195 388 MobiDBLite consensus disorder prediction 23 48 - -
Lele55g1195 388 CDD STKc_IRAK 83 360 - -
Lele55g1195 388 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 163 373 - -
Lele55g1195 388 MobiDBLite consensus disorder prediction 362 388 - -
Lele55g1195 388 ProSiteProfiles Protein kinase domain profile. 77 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele55g1195 388 MobiDBLite consensus disorder prediction 362 378 - -
Lele55g1195 388 ProSitePatterns Serine/Threonine protein kinases active-site signature. 207 219 IPR008271 GO:0004672|GO:0006468
Lele55g1195 388 ProSitePatterns Protein kinases ATP-binding region signature. 83 112 IPR017441 GO:0005524
Lele55g1195 388 Pfam Protein kinase domain 79 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele55g1195 Lele-ChrLele55 18568092 18570197 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g1195 1 384 Glycoside Hydrolase AT3G07070 41.103 2.42e-93 284
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lele55g1195 Pkinase 1.2e-43 CL0016