Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g1190 ATGTCAAAATCACTGTCTTTCCCTTCGGAAGCGACACTTCCAGTCTGGTGCTTCTTCTCTTGTCGTCTGTTGTATTGCGAAAGCAAGCCGGTTTTGGTCTTTGGGAGGTTGGACATGGAGGAAAGGTATGAGGCATTGAAGGATCTTGGTTCTGGGAATTTCGGAGTGGCCAGGCTGGTCAGAGATAAGAAGACTAAAGAGCTCGTTGCTGTCAAATACATTGAAAGAGGGAAAACGATTGATGAGAATGTTCAAAGGGAGATCATCAACCACCGATCTTTAAGGCATCCGAACATTATCAAGTTCAAAGAGGTTGTTCTGACCCCAACCCATTTGGCTATTGTCATGGAGTACGCTGCAGGTGGTGAACTCTTTGAGAAGATATGCAGTGCTGGTCGATTCAGTGAAGATGAGGCAAGATTTTTCTTTCAGCAGCTAATTTCTGGAGTTAGCTACTGTCATTCAATGGAGATTTGTCATAGAGATCTGAAATTGGAGAACACTCTCTTGGATGGAAGTCCGAATCCTCGAGTTAAAATATGTGACTTTGGTTACTCCAAGTCTGCTTTACTTCATTCTCAACCGAAATCAACCGTTGGAACTCCGGCTTACATTGCTCCAGAAGTTCTGTCCCGAAAGGAGTATGATGGAAAGATTGCAGACGTATGGTCCTGTGGTGTGACATTGTATGTCATGTTAGTTGGAGCATACCCGTTTGAAGATCCTGAAGATCCTAGGAATTTCCGAAAGACAATTGGGAGAATAATGAGCGTTCAGTACAGCATACCCGACTATGTACGTGTCTCTGCAGACTGCAGACATATTCTTTCTCGCATATTTGTCGCCAATCCTGCTAAGAGGATAAGCCTATCGGAGATAAAACAGCATCCATGGTTTCTGAAGAACTTGGCGAAGGAGACGGCAAAAGGGAAGGAGGAAGCAGAGAAAGAGGAAGGAAGGCAAAGTGTGGAAGACATAATGAGGATCATACAAGAGGCAAGAACTACAACAGTGGGGCAAGGATCATCCAACTGTGGAGGCCTAGCTGTTGGAGTCTCATTGGATGATGGGGATCTTCAGGCAGATGAGGAACCTGAAGTTGACGTTAGTGGTGACTATGCTCAGAACTAG 1131 0.4492 MSKSLSFPSEATLPVWCFFSCRLLYCESKPVLVFGRLDMEERYEALKDLGSGNFGVARLVRDKKTKELVAVKYIERGKTIDENVQREIINHRSLRHPNIIKFKEVVLTPTHLAIVMEYAAGGELFEKICSAGRFSEDEARFFFQQLISGVSYCHSMEICHRDLKLENTLLDGSPNPRVKICDFGYSKSALLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFRKTIGRIMSVQYSIPDYVRVSADCRHILSRIFVANPAKRISLSEIKQHPWFLKNLAKETAKGKEEAEKEEGRQSVEDIMRIIQEARTTTVGQGSSNCGGLAVGVSLDDGDLQADEEPEVDVSGDYAQN 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g1190 376 Coils Coil 300 320 - -
Lele55g1190 376 FunFam Serine/threonine-protein kinase SRK2E 119 307 - -
Lele55g1190 376 SMART serkin_6 43 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele55g1190 376 Gene3D Phosphorylase Kinase; domain 1 29 118 - -
Lele55g1190 376 Gene3D Transferase(Phosphotransferase) domain 1 119 307 - -
Lele55g1190 376 CDD STKc_SnRK2 42 298 - -
Lele55g1190 376 MobiDBLite consensus disorder prediction 356 376 - -
Lele55g1190 376 ProSiteProfiles Protein kinase domain profile. 43 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele55g1190 376 FunFam Serine/threonine-protein kinase SRK2E 39 118 - -
Lele55g1190 376 ProSitePatterns Serine/Threonine protein kinases active-site signature. 158 170 IPR008271 GO:0004672|GO:0006468
Lele55g1190 376 SUPERFAMILY Protein kinase-like (PK-like) 32 304 IPR011009 -
Lele55g1190 376 Pfam Protein kinase domain 43 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele55g1190 376 ProSitePatterns Protein kinases ATP-binding region signature. 49 72 IPR017441 GO:0005524
Lele55g1190 376 PANTHER SERINE/THREONINE KINASE 41 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g1190 Lele-ChrLele55 18512297 18516002 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g1190 42 326 CBL-interacting serine-threonine protein kinases AT2G30360 40.404 5.79e-67 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Lele55g1190 Pkinase 2.7e-71 CL0016