Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g1188 ATGTCGTCCTGCTCGTCGGAGAACTCCGAGATTTCTGACGTGAAGCCGCCGGCCAAGTCGTCGGAGCAGTCAGCCTTCTCTCAGACTTGTAGCCTGTTGAGTCAGTACCTCAAGGAAAAAGGCAGCTTCGGAGATCTTAGTCTCGGAATGAAATGCAACATCAAAGGAACTGGGTCTCATGAGACATCTTGTCACTCTGCAACAATGAAGAACCTTCTTCCGACCAAGACTCCTGTGAATCCCACTGTGATGATGAATTCTGTGAGTATGGATCCTAAATCTGCTCAGTTGACAATCTTTTATGGTGGACAAGTTCTTGTGTTCGATGATTTTCCATCTGAGAAAGCTAAGGAGATCATGTCCCTTGCAAACAAAGGAATCTCCCAAACTCAGAACAGATCTGCTTATAATGTTTCCAGCAATTTGGTTCAAGAACACTCTCAAGCACAACCCAGACCTGTTATTGCTGATCTACCAATTGCTAGGAAAGCTTCACTTCATCGGTTCTTAGAGAAGAGAAAGGATAGAATTGCTGCCAGAACTCCATATCAGACAAACAATGTCAAGAAGCCAGCTGAAGAGGTGCCATGGATGAGCTCGTCTCCTAATTCACCACAAGTCTGA 624 0.4519 MSSCSSENSEISDVKPPAKSSEQSAFSQTCSLLSQYLKEKGSFGDLSLGMKCNIKGTGSHETSCHSATMKNLLPTKTPVNPTVMMNSVSMDPKSAQLTIFYGGQVLVFDDFPSEKAKEIMSLANKGISQTQNRSAYNVSSNLVQEHSQAQPRPVIADLPIARKASLHRFLEKRKDRIAARTPYQTNNVKKPAEEVPWMSSSPNSPQV 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g1188 207 MobiDBLite consensus disorder prediction 177 207 - -
Lele55g1188 207 SMART tify_2 90 125 IPR010399 -
Lele55g1188 207 MobiDBLite consensus disorder prediction 1 22 - -
Lele55g1188 207 Pfam Jas motif 159 184 IPR018467 -
Lele55g1188 207 ProSiteProfiles Tify domain profile. 90 125 IPR010399 -
Lele55g1188 207 Pfam tify domain 92 124 IPR010399 -
Lele55g1188 207 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 19 194 IPR040390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g1188 Lele-ChrLele55 18505488 18506998 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g1188 20 184 Tify Gene Family AT1G19180 39.151 2.23e-42 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Lele55g1188 tify 1.6e-19 No_clan